Gene Information

Name : ssb (NAMH_1363)
Accession : YP_002607756.1
Strain : Nautilia profundicola AmH
Genome accession: NC_012115
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1261525 - 1261998 bp
Length : 474 bp
Strand : -
Note : identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621

DNA sequence : 
ATGTATAATAAAGTTATTCTCGTAGGAAACTTAACACGTGACGTTGAATTAAAATATACGCCTACGGGAACAGCTATTGC
CAAATTCGGACTGGCTACTAATAGAACATTTAAAGATAACGTAACCGGAGAAAACAAACAAGAGGTTATGTTTATTGATA
TAACTGTTTTCGGAAGAAGTGCCGAAATAGCCAACCAGTACCTTAGAAAAGGTAGAAAAGTATTAATTGAAGGTCGTTTA
GTTCTTGACCAATGGGTAGATGGGAACGGACAAAAACGCAGCAAACATTCTATAGTTGCAGAAAAAGTGCAGTTTATGGA
GAATAAAAACAGCGGAGATGAAGGCGGATACCAACAATCAACACCTTCATATAATCAACCGCAGCAGCCGACGGCTCAGC
CACAGATGCAACAAAAACAAAATCAAAACAATATTCCGTCAATCGATATCGATGACGAAGAAATACCATTTTAA

Protein sequence : 
MYNKVILVGNLTRDVELKYTPTGTAIAKFGLATNRTFKDNVTGENKQEVMFIDITVFGRSAEIANQYLRKGRKVLIEGRL
VLDQWVDGNGQKRSKHSIVAEKVQFMENKNSGDEGGYQQSTPSYNQPQQPTAQPQMQQKQNQNNIPSIDIDDEEIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-16 43
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 4e-16 43
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 4e-16 43
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 3e-16 43
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 3e-16 43
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 3e-16 43