Gene Information

Name : HRM2_46850 (HRM2_46850)
Accession : YP_002605905.1
Strain : Desulfobacterium autotrophicum HRM2
Genome accession: NC_012108
Putative virulence/resistance : Resistance
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 5265244 - 5266596 bp
Length : 1353 bp
Strand : -
Note : -

DNA sequence :
ATGAAACAGAAGATCAGCGTTTTAATCGTGGACGACGAACTCATCGTCCGGGAGTCCCTGTTTCACTGGTTTAAAAAGGA
AGGATACACGGCGGACACGGCACCGTCCGGTGAGGCGGCCCTTGGGATGCTGGAAAAGCAGAGCTTTGACGTTCTGTTTG
TGGACATGAAGATGCCGGGAATGGACGGCCTGGAGCTTGTGCGGCAAACCAGGGAGCGCTATCCTGATTCGTCCGTTGTT
ATCATCACGGCCTACGGTTCCATTGACACGGCCGTCACGGCCATGAAAAAGGGGGCTGCCGACTATCTTTTAAAGCCGTT
CAAGCCGGATCAGCTTGCCCTGGTCATGGAAAAGATTCTGCACCAGAAACGCATGGACAATGAATGTCGGTTTTTAAAGG
GTGAGCTGAGCAAGAGGACCCGGTTTGACAACATCATCGGCGAATCCGCCGGTATGCAGCAGCTTTATACCATGATAACC
GATGTGGCTGAAACCGATGCTCCTGTGCTGATTCTCGGAGAGACGGGAACGGGCAAGGAGCTTGTGGCAAAGGCCATACA
TGCCAAGAGTTCCCGGAAAAATTCGCCGTTTATTCCCATCAATTGCGGCTCGCTTCCCGACACCCTCATGGAGAGCGAGC
TCTTTGGTTTTACCCGGGGGGCGTTCACCGGCGCCCATACCGGCCGTAAGGGGTATTTTGAGGTGGTCGAGGGTGGGACT
CTTTTTCTTGACGAAATCGGCGAAGTGAGCCAGAGGATGCAGGTGGATCTTTTGAGGGTGCTGGAGGATAAAAAGATAAC
AAAGATCGGCGAGACAACCCCCAGGGAGGTTGACTTCAGGCTGATATCCGCCACACGTCAGAAGCTTGACCAGATGATCC
GGACCGGTGCCTTTCGTCAGGATCTCTTTTTCCGGATAAACGTAATCACCCTTGAGGTGCCTGCCCTGAGAAACAGGGCG
TCGGATATTCCCCTGCTGGTGGACCATTTTCTTGAACGATACAGCAGTGAAACCAATCGCCAGGTGGACCGGGTAAATCC
GGCCGCCATGGAGGCCCTGATCTGCTATGACTGGCCCGGTAACGTCCGGGAGCTTGAGAATGCCGTTGAAAGAGCCGTGG
TGCTTTCAAAATCAAGGACCCTGACCCTTGCCGATTTTAGATTCCTGTTCCAGGGGGAGGGTTCGACACCTGCCCAAGGA
TCAATGGGCACGCTCAAGCAGGTGGAAAAGGATCATGTGACAGGGATTCTGAACCGTACGGGGTGGAACATCACCCGGAC
AGCCAAGATACTTGATGTGAGCAGAACCACCCTCCACAGGATTATCCGGCGAAATGAACTTGAAAAACCGTGA

Protein sequence :
MKQKISVLIVDDELIVRESLFHWFKKEGYTADTAPSGEAALGMLEKQSFDVLFVDMKMPGMDGLELVRQTRERYPDSSVV
IITAYGSIDTAVTAMKKGAADYLLKPFKPDQLALVMEKILHQKRMDNECRFLKGELSKRTRFDNIIGESAGMQQLYTMIT
DVAETDAPVLILGETGTGKELVAKAIHAKSSRKNSPFIPINCGSLPDTLMESELFGFTRGAFTGAHTGRKGYFEVVEGGT
LFLDEIGEVSQRMQVDLLRVLEDKKITKIGETTPREVDFRLISATRQKLDQMIRTGAFRQDLFFRINVITLEVPALRNRA
SDIPLLVDHFLERYSSETNRQVDRVNPAAMEALICYDWPGNVRELENAVERAVVLSKSRTLTLADFRFLFQGEGSTPAQG
SMGTLKQVEKDHVTGILNRTGWNITRTAKILDVSRTTLHRIIRRNELEKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 5e-66 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 5e-66 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HRM2_46850 YP_002605905.1 response regulator BAC0467 Protein 3e-86 43
HRM2_46850 YP_002605905.1 response regulator BAC0089 Protein 2e-88 41