Gene Information

Name : HRM2_42960 (HRM2_42960)
Accession : YP_002605516.1
Strain : Desulfobacterium autotrophicum HRM2
Genome accession: NC_012108
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4810605 - 4811294 bp
Length : 690 bp
Strand : +
Note : -

DNA sequence : 
TTGGACATTTATCTCGATAAAATCAGCAAGTCACACACAGACAGCAATGCCCATCGATTGTTATTCAACAATATGGACGC
CCGGTTTGAATCGGGTCAATTTAATGTGATCATTGGTAAGAGTGGTGTGGGAAAGAGCTCCCTGCTCAACCTGATCAGCG
GGATAGACCTGCCGGATAAAGGTCAGATTCGCATGGGCGATTCAAACTTGTCTGCAATGACGGATACTCAACGAACCATT
TTCAGACGAAAGCATATCGGTTTCATCTACCAGTTTTTCAACCTCATCCCTGTGCTCACGGTCATGGAAAACCTTACGCT
GATCAGTGAATTAGATGGAAAGCCCAAAAAAGCATACCTGAACCGTGCACAGGAGCTGTTAAAAACAGTCGGGCTCTTTG
ACCGAAAAAACGACTACCCAGACACACTCTCCGGCGGTGAACAGCAGCGGATTGCCGTGGTCAGATCCCTGGTCAATGAG
CCGGAAATCATTCTTGCCGATGAACCCACAGGTAACCTTGACCTGAAAACAGGCCGTTTGGTCCTTGAGCTCATATCTGA
ACTGACCATAAAAAACAAAAATACCCTTGTCATGGTGACCCACAGCCCCGAAGCTGTTGACTATGCGGATCAGGTCTTCA
GAGTTGAAAACCAGACATTGGTCCTTGAATCCAGCAAATTGAGCCGCTGA

Protein sequence : 
MDIYLDKISKSHTDSNAHRLLFNNMDARFESGQFNVIIGKSGVGKSSLLNLISGIDLPDKGQIRMGDSNLSAMTDTQRTI
FRRKHIGFIYQFFNLIPVLTVMENLTLISELDGKPKKAYLNRAQELLKTVGLFDRKNDYPDTLSGGEQQRIAVVRSLVNE
PEIILADEPTGNLDLKTGRLVLELISELTIKNKNTLVMVTHSPEAVDYADQVFRVENQTLVLESSKLSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-29 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HRM2_42960 YP_002605516.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 6e-35 45
HRM2_42960 YP_002605516.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 7e-36 42
HRM2_42960 YP_002605516.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-27 41