|
Name : dctM9 (HRM2_42860) Accession : YP_002605506.1 Strain : Desulfobacterium autotrophicum HRM2 Genome accession: NC_012108 Putative virulence/resistance : Virulence Product : protein DctM9 Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 4798694 - 4799974 bp Length : 1281 bp Strand : + Note : TRAP-type C4-dicarboxylate permease, large subunit DctM9 DNA sequence : ATGATACTTTTGCTTTGCAGTGTTTTTCTGATAACCCTGATCCTGGGATTTCCAGTGGCGTTCTGCCTGGGCATAACATC CCTGGCTGCATTGATTGTCAGTGATGTCCCCCTGGTGCTCATGACCCAGCGGCTGTTTACCGGGATAGACTCCTTTCCCC TGATGGCGGTTCCGTTTTTTGTACTTGCCGGAGAGCTGATGAACCGGGGAGGAACCACACGCCGGCTCATTGATTTTGCC AATGTCCTGGTCGGTCGGATTCCCGGCGGACTTGCCCATACCAATATCCTGGCTTCCATGTTTTTCGGCGGCATCAGCGG TTCTGCCGTGGCAGATGCCGCAGCCATGGGTACCATCCTTGTACCGGGCATGATAAGAAAAGGCTTTTCCCCGGGATTCA GTGCCGCAGTTACTGCCGCCTCTTCAACCATGGGGCCGATCATACCCCCGTCCATCCTCATGGTGCTCATGGGGGTTACC ACGGGCCTGTCCATCGGCGGGCTGTTTGCCGCCGGCATCATCCCGGGCACCCTCATCGGTGTGTCCATGATGGGGTTAAG TTATTTCATGGCCATCCGGTATTCCTTTCCAAAGGAAACCATGGCCCTGAGTCCGTTGATTCTATGGAAGGAGTTTGTTT CAGCAGGACCGGCCCTTCTGGCACCGTTCATTATTCTTGGCGGCATTCTGGGCGGGGTGTTTACGCCCACGGAAGCCGCA GCAATAGCTGTCCTCTACGCCTTTATTCTGGGCAGATTCATCTACCGGGAGCTCACGGTAAGGGACATGGGTGACGTATT CATCCAGAGCGGAATCACCACCGCTGTCCTGCTGATCATCATCGGCATGGCCAACATCTTCGCATGGGTCCTGACATCAG AACAGATCCCTACCCGGATCGCCCAGGCCATGCTTGCCCTGACCAGCAACCCCTACGCCATCCTGATGATGATCAACGTC TTTCTCATCTTCATCGGCATGTTCCTCGAAGGCGGGGCTGCCATCATCATCCTGGCACCAACCCTTCTCCAGGTTACCAA TGCCGTGGGGATCGATCCCCTGCACTTCGGCCTGATCATGGTCCTGAACCTTTCTGTGGGGCTGCTCACCCCCCCCCTGG GCGTCTGTCTGTTTGTTGTCTGCGGGGTCACCCGCATCGATTTTTCGGTGATTGTCAGGGCAGTCATCCCCTTTCTTCTA TTAGAAATCGGTGTCCTTCTTGTGGCAACCTATTTCCCCTGGCTGATTTTGTTTGTTCCAAAATTTCTCGGTTACGTATA G Protein sequence : MILLLCSVFLITLILGFPVAFCLGITSLAALIVSDVPLVLMTQRLFTGIDSFPLMAVPFFVLAGELMNRGGTTRRLIDFA NVLVGRIPGGLAHTNILASMFFGGISGSAVADAAAMGTILVPGMIRKGFSPGFSAAVTAASSTMGPIIPPSILMVLMGVT TGLSIGGLFAAGIIPGTLIGVSMMGLSYFMAIRYSFPKETMALSPLILWKEFVSAGPALLAPFIILGGILGGVFTPTEAA AIAVLYAFILGRFIYRELTVRDMGDVFIQSGITTAVLLIIIGMANIFAWVLTSEQIPTRIAQAMLALTSNPYAILMMINV FLIFIGMFLEGGAAIIILAPTLLQVTNAVGIDPLHFGLIMVLNLSVGLLTPPLGVCLFVVCGVTRIDFSVIVRAVIPFLL LEIGVLLVATYFPWLILFVPKFLGYV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 2e-60 | 43 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 2e-60 | 43 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 2e-60 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| dctM9 | YP_002605506.1 | protein DctM9 | VFG1110 | Protein | 9e-61 | 43 |
