Gene Information

Name : HRM2_39530 (HRM2_39530)
Accession : YP_002605175.1
Strain : Desulfobacterium autotrophicum HRM2
Genome accession: NC_012108
Putative virulence/resistance : Unknown
Product : transposase (IS66 family protein)
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 4444389 - 4444742 bp
Length : 354 bp
Strand : -
Note : -

DNA sequence :
ATGTTTTTGACCTCATCCAACATTCGGGTCTACCTGGCCATGGGCATTACCGACATGCGTAAATCCATTGACGGTTTGTC
GATCCTGGTAAGTGAACATCTGGAACTTGACCCCTTTTCCGGCCATCTGTTTGTTTTTTGCAATCGAAAACGCAATATGA
TTAAAATCCTTTATTGGGACAGGAATGGTTTCTGCCTGTGGCACAAAAGGCTGGAGAAACATTTCTTTAAATGGCCAACT
TCCAAAGAGGAGATCATGACCATTGAGAAACGTGAACTCACCTGGTTGATGGATGGCCTCAATATTCATCAGAAAGAGGC
CCACAATTCCTTGAAATATTCGACACTTTATTGA

Protein sequence :
MFLTSSNIRVYLAMGITDMRKSIDGLSILVSEHLELDPFSGHLFVFCNRKRNMIKILYWDRNGFCLWHKRLEKHFFKWPT
SKEEIMTIEKRELTWLMDGLNIHQKEAHNSLKYSTLY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF71493.1 unknown Not tested Hrp PAI Protein 1e-18 47
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 3e-16 44
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 3e-16 44
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 4e-16 43
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 7e-15 42
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 7e-15 42
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 2e-15 41
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 1e-14 41
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 2e-15 41
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 1e-14 41
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 2e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HRM2_39530 YP_002605175.1 transposase (IS66 family protein) VFG1737 Protein 1e-16 43