Gene Information

Name : fliP (HRM2_37160)
Accession : YP_002604938.1
Strain : Desulfobacterium autotrophicum HRM2
Genome accession: NC_012108
Putative virulence/resistance : Virulence
Product : protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 4171333 - 4172109 bp
Length : 777 bp
Strand : -
Note : flagellar biosynthetic protein FliP

DNA sequence :
ATGACGCCTAAAGGCCACGTTCGGACCCTGGCAGTTCCCCTTGTTGCCTGCCTCTTTTTGGGGTTGGTACTTCCTTCCAT
GGTTCAGGGTGCCACCTTTCCCATCCCATCGTTTAATTTCGGAATCGGGCAGGCCCAGGGACCTGAGGATGTGGCCGTTG
TTCTTGAAATTATAGCGCTTCTGACCATCCTTGCCCTTGCTCCGGCCATCTTGATTCTCATGACACCGTTCACACGAATC
ATTGTGGTGTTTCATTTTCTGCGCCAGGCCATCGGTACCCAGTCAAGCCCACCAAACCAGGTGGTTGTGGGGCTTGCACT
CTTTCTGACTTTTTTCATTATCAAACCCGTTGCCCTGGATGTTTACCAAAACGCCCTCAACCCCTACCTGGAACGGCAGA
TCGACTACAACGAGGCCTTTACGGCGGCCCAAGTACCCATCCGTAACTTTTTACTGGTCAACACCCGGGAGGCCGACATT
GCTCTTTTTGTCAAGGGGGCCGGGGTGGCAAAGCCCGATACCCGGGAGGATGTTTCCCTGATGCTTTTGATTCCTGCCTA
TGTGATCAGTGAGCTCAAAACCGCCTTTATCATTGGATTTGTCATCTATGTTCCTTTTCTTGTCATTGACATGGTGGTCG
CCTCGGTGCTTCTGGCCATGGGAATGATGATGCTGCCGCCGGTTATGATTTCCCTTCCCTTCAAGCTCATGCTCTTTGTG
CTTGTGGATGGGTGGCATCTTTTGACCGGTTCACTCTTGAAAAGTTTTGGAGTGTGA

Protein sequence :
MTPKGHVRTLAVPLVACLFLGLVLPSMVQGATFPIPSFNFGIGQAQGPEDVAVVLEIIALLTILALAPAILILMTPFTRI
IVVFHFLRQAIGTQSSPPNQVVVGLALFLTFFIIKPVALDVYQNALNPYLERQIDYNEAFTAAQVPIRNFLLVNTREADI
ALFVKGAGVAKPDTREDVSLMLLIPAYVISELKTAFIIGFVIYVPFLVIDMVVASVLLAMGMMMLPPVMISLPFKLMLFV
LVDGWHLLTGSLLKSFGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 1e-30 45
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 2e-27 41
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 2e-27 41
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 1e-27 41
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 6e-19 41
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 5e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_002604938.1 protein FliP VFG2338 Protein 1e-48 60
fliP YP_002604938.1 protein FliP VFG2494 Protein 3e-50 59
fliP YP_002604938.1 protein FliP VFG1259 Protein 4e-51 59
fliP YP_002604938.1 protein FliP VFG2016 Protein 1e-47 53
fliP YP_002604938.1 protein FliP VFG0394 Protein 2e-31 43
fliP YP_002604938.1 protein FliP VFG0519 Protein 8e-28 41
fliP YP_002604938.1 protein FliP VFG0188 Protein 3e-31 41