Gene Information

Name : HRM2_34150 (HRM2_34150)
Accession : YP_002604654.1
Strain : Desulfobacterium autotrophicum HRM2
Genome accession: NC_012108
Putative virulence/resistance : Virulence
Product : putative ABC-type manganese/zinc transport system, ATPase component
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 3869274 - 3870035 bp
Length : 762 bp
Strand : +
Note : -

DNA sequence : 
ATGAACACTAAATCCAAATTTGCCATTGAGGTTGCACACCTGACCGTCAGTTACAATGCACGACCGGCCCTGTTGGATGT
GAGTGTGAACATTGAGGCCGATCAACTGGTCGGTGTCATTGGTCCCAACGGTGCCGGAAAATCTACGTTTATCAAGGCGG
TTCTTGGATTTGTAAAGCCAGATCTGGGAACAGTTCGCATCGCAGGAAGCAATGCCCAGAATGCAAAGGGGCTGGTTGCT
TATGTTCCCCAGCGGGGTGCCGTTGACTGGGACTTTCCGATAACTGTAAAAGAGGTCGCTCTCATGGGCCGTTATCAAAA
AATCCCCTGGTATTCATCCCCTGGAAAAAAAGACTGGGAAACTGCAATGGAAGCCCTGAAAATGGTCAGAATGGAAGAAT
TTTCAGATCGGCAGATCGGAGAACTTTCAGGCGGGCAACAGCAAAGGGTTTTCATGGCAAGGGCCCTGGCCCAGGGCAGC
AATATTTTATTATTGGATGAACCCTTTGCCGGTGTGGACGCGGCGACGGAACGGGCCATTCTGGAAGTGCTTGACCGGGC
AAAAAAATCTGGAAAAACGCTGGTGGTGGTCCACCACGATCTGTCAACTGCTGCTGAATACTTTGACAAACTTCTGCTTA
TCAAGCAACGGTTATATGCCTATGGGGAACCCACTGCTGTTCTTCAGGAGGACCTTCTCAGTCAGGTTTACGAAGGCCGG
CTGAGAATATTCAAGGATATCGTAAAAAAGGAGAATACCTGA

Protein sequence : 
MNTKSKFAIEVAHLTVSYNARPALLDVSVNIEADQLVGVIGPNGAGKSTFIKAVLGFVKPDLGTVRIAGSNAQNAKGLVA
YVPQRGAVDWDFPITVKEVALMGRYQKIPWYSSPGKKDWETAMEALKMVRMEEFSDRQIGELSGGQQQRVFMARALAQGS
NILLLDEPFAGVDAATERAILEVLDRAKKSGKTLVVVHHDLSTAAEYFDKLLLIKQRLYAYGEPTAVLQEDLLSQVYEGR
LRIFKDIVKKENT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 5e-45 43
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 4e-45 43
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-43 42
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 5e-44 42
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 4e-44 42
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 5e-43 41
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 5e-43 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HRM2_34150 YP_002604654.1 putative ABC-type manganese/zinc transport system, ATPase component BAC0400 Protein 3e-53 50
HRM2_34150 YP_002604654.1 putative ABC-type manganese/zinc transport system, ATPase component BAC0350 Protein 2e-44 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HRM2_34150 YP_002604654.1 putative ABC-type manganese/zinc transport system, ATPase component VFG0526 Protein 2e-44 42