Gene Information

Name : HRM2_33220 (HRM2_33220)
Accession : YP_002604561.1
Strain : Desulfobacterium autotrophicum HRM2
Genome accession: NC_012108
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3757713 - 3758600 bp
Length : 888 bp
Strand : +
Note : -

DNA sequence :
ATGGACCGTCTGATTGACCGATACATGGCACACCTGACCCTTGAACGGGGGCTTGCCCAGAACAGCCTGACATCCTATGC
CATGGATCTTGCAACCTTTGCTGATTTCCTTGAAACCAACCAGATTTCAGCCCTTGACCAGGTTGACACCGTGGTGATCC
TTGCCTGGCTTGTCCACCTGGAGGCAAAAGGCCTCTCACCGCGGTCACGGGCCAGACACCTCATTGCCGTACGCGGGTTT
TATCGCTTTTTGGCTCTGGAAAACCTGACCCGGTCAAACCCGTTGAGACTGATTGACATTCCCAAGGCAGGAACCCGTCT
GCCCCGGTTCCTTTCCCAGGATCAGGTCACGGCCCTCCTGGAAATGCCGGACCGAACCACCCACAGGGGCCTTCGCAATG
CAGCCATGCTTGAGATCCTCTATGGTGCTGGGCTGAGGGTTTCAGAGCTTGTCGGTCTAAAAACGGAACAGGTGGATCTT
GTGGCCTGTTTTGTCAGACTCTTTGGCAAGGGTTCAAGGGAAAGAATCGTCCCCTTTGGATCCCATGCCAGGCAGCGCAC
CATGGAATGGCTGGAATGGGGACGACCCTGGATGCTCAAAAAGAATGCAAGCCGTTATCTCTTTGTTGCAAGGGCTGGTA
ACCCCATGACCCGCCAGGGATTCTGGAAGCTTTTGAAAAAATATGCACTTGGGGCGGGCATCTCAATAAAGGTTTCCCCC
CACACCCTGCGCCACTCATTTGCCACCCACCTGCTCGAGGGTGGTGCAGACCTGAGAAGCGTCCAGACCATGCTTGGCCA
CGCAGACATTGCCTCTACCCAGATTTACACCCATGTGTCAAGGCAGTACCTGGTTGACATGCATAAAAAATACCATCCCA
GGGGATAA

Protein sequence :
MDRLIDRYMAHLTLERGLAQNSLTSYAMDLATFADFLETNQISALDQVDTVVILAWLVHLEAKGLSPRSRARHLIAVRGF
YRFLALENLTRSNPLRLIDIPKAGTRLPRFLSQDQVTALLEMPDRTTHRGLRNAAMLEILYGAGLRVSELVGLKTEQVDL
VACFVRLFGKGSRERIVPFGSHARQRTMEWLEWGRPWMLKKNASRYLFVARAGNPMTRQGFWKLLKKYALGAGISIKVSP
HTLRHSFATHLLEGGADLRSVQTMLGHADIASTQIYTHVSRQYLVDMHKKYHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-50 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-50 43