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Name : gspE3 (HRM2_30260) Accession : YP_002604273.1 Strain : Desulfobacterium autotrophicum HRM2 Genome accession: NC_012108 Putative virulence/resistance : Virulence Product : protein GspE3 Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3445276 - 3446808 bp Length : 1533 bp Strand : - Note : general secretion pathway protein GspE (ATPase family protein) DNA sequence : TTGACGAAGAAACCTATCGAATCGGTATCATACAATGATTTTCCAAAGGAACCTGTTCCCCTGGAAAATTTGTCGGTAAA ATTTATGAAGCAGTCTGTTTTCGTGCCCCTGGCACTTGAAAACAATACCTTGAAGATTGCCATTGCCGACCCCCATGATT CTTATACCATTGATGCCCTGAAGCTTTCCTACAGTTTTGATGTGGAGGTTTTTCAAGCGTCAAAGGAGGAGATCTTTGAT GCCTTTGAGCGCCTGTACGGAAGTGGCAGTCAGTCCATTGAAACCATCATAGAAGAAGCACACAGGGATGTCCATGAACT CAATATCGGTGAGGAAGAAGGGGCTGAAAATTTAAAAGATCTTGCCTCCGAAGCCCCCATCATTCGCCTTGTGAACCGGC TCATTGTCAATGCCGTAGAAATAAAGGCAAGCGACATCCATTTTGAACCCTTTGAAACATTTTTCAGGATTCGGTACCGT ATCGACGGGGTTTTACACGAGATTGAAAAACCACCGGTGAGACTCCAGTCTGCCATCATTTCCCGGGTGAAAATTATGGC CAAGCTTGATATAGCCGAGCGCCGTCTGCCCCAGGATGGTAACATCAAACTCAAAATTTCAGACCGTGAGATAGACTTCA GGGTGTCGACCATTCCCACCCTGTATGGCGAGAGCCTTGTGATGAGGGTCCTGGATAGAGAATCCCTTGCCTTTGATTTT CAGGAACTTGGCTTCCCCGAGGATATCTATTCCCGGTATATGGACCTCGTCAAACAACCCTATGGCATGATTCTAGTGAC AGGCCCCACGGGAAGCGGAAAGACCTCAACGTTGTATACGACCCTGGCCGTGATCAACTCAACAGAGCAAAAGGTGATAA CCCTTGAGGACCCAGTGGAGTATCAACTGCCCGGAGTCAATCAGATCCAGGTGAAGCCCAAGATCGGCCTCACCTTTGCC AATGGGCTGAGATCCATTGTCCGCCAGGACCCGGATATCATCCTGGTCGGAGAGATCCGGGATTCCGAAACCGCAGAGAT TGCCATCCAGTCCGCCCTGACCGGCCATCTTCTTTTCAGTACGCTCCATACCAATGATTCTGCAGGTGCCATCGCACGGT TGCTTGACATGGGGGTCGAGCATTTTTTGTTGAGTTCTACCCTGCTTGGGGTGCTTGCCCAGCGGCTGGTGCGGGTGATC TGTCCCCACTGCAAAACCGTGGCCCACCCGGAACAAAGACTCCTCGATCTCGTCCGATTATCGCCCGAGGAGCTTTCCGA AACGGTCTTTTACGAGGGAAAAGGATGCGAGGCGTGTCACTACACGGGATTTAAGGGTCGAAAGGCCATTTTTGAATACC TCGCAGTGGATGCCGCCATACGAAGGGAGATTGTGAATAAATCCAGTGCGGATGAGATCAAGCGGGTGGCTGTAAATTCG GGGCTTCGAACATTGAGGCAGGATGGCTGGGAAAAGGTAAAGGCCGGCATGACAACCATTTCAGAAGTACTTCGGGTAAC CCTGGAGGGATGA Protein sequence : MTKKPIESVSYNDFPKEPVPLENLSVKFMKQSVFVPLALENNTLKIAIADPHDSYTIDALKLSYSFDVEVFQASKEEIFD AFERLYGSGSQSIETIIEEAHRDVHELNIGEEEGAENLKDLASEAPIIRLVNRLIVNAVEIKASDIHFEPFETFFRIRYR IDGVLHEIEKPPVRLQSAIISRVKIMAKLDIAERRLPQDGNIKLKISDREIDFRVSTIPTLYGESLVMRVLDRESLAFDF QELGFPEDIYSRYMDLVKQPYGMILVTGPTGSGKTSTLYTTLAVINSTEQKVITLEDPVEYQLPGVNQIQVKPKIGLTFA NGLRSIVRQDPDIILVGEIRDSETAEIAIQSALTGHLLFSTLHTNDSAGAIARLLDMGVEHFLLSSTLLGVLAQRLVRVI CPHCKTVAHPEQRLLDLVRLSPEELSETVFYEGKGCEACHYTGFKGRKAIFEYLAVDAAIRREIVNKSSADEIKRVAVNS GLRTLRQDGWEKVKAGMTTISEVLRVTLEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-93 | 48 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-93 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE3 | YP_002604273.1 | protein GspE3 | VFG0182 | Protein | 6e-97 | 50 |
| gspE3 | YP_002604273.1 | protein GspE3 | VFG1876 | Protein | 2e-93 | 49 |
| gspE3 | YP_002604273.1 | protein GspE3 | VFG2048 | Protein | 9e-95 | 48 |
| gspE3 | YP_002604273.1 | protein GspE3 | VFG2426 | Protein | 2e-82 | 44 |
| gspE3 | YP_002604273.1 | protein GspE3 | VFG1880 | Protein | 2e-95 | 42 |
| gspE3 | YP_002604273.1 | protein GspE3 | VFG0112 | Protein | 6e-98 | 41 |
