Gene Information

Name : gspG2 (HRM2_30240)
Accession : YP_002604271.1
Strain : Desulfobacterium autotrophicum HRM2
Genome accession: NC_012108
Putative virulence/resistance : Virulence
Product : protein GspG2
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 3443562 - 3444002 bp
Length : 441 bp
Strand : -
Note : general secretion pathway protein GspG (Type II secretory pathway)

DNA sequence :
ATGAAACTAAAATCTGAAAATAGGGAACGAGGCTTTACTTTGATTGAGCTGTTGATCGTTATGGTTATCATTGGCTTGCT
TGCAGGGCTTGTGGGACCTAAGATGTTTGGAAAGGTAGGAAAATCAAAACAGAAATCAGCAAAGGCCCAGATATCTCTTT
TTGAGACGACCCTTGACATATACCGGCTTGATGTGGGGAAATACCCCACCACCGATATTGGGCTGCAGGGACTCAGAGTT
AAACCTGATGGAGTGGAAAACTGGGATGGCCCCTATCTTCCAAAGGAGGTGCCCCTGGACCCCTGGGGTAACGCCTACCG
CTATGAATCTCCATCGGAACACGGGGAATACGAGATTGTCTCCTTTGGTGCAGACGGTGTTGATGGCGGGGAAGGTGAAG
ACATGGACATTGTGAGCTGGGCTGCTGTTGGTCAGGAGTAG

Protein sequence :
MKLKSENRERGFTLIELLIVMVIIGLLAGLVGPKMFGKVGKSKQKSAKAQISLFETTLDIYRLDVGKYPTTDIGLQGLRV
KPDGVENWDGPYLPKEVPLDPWGNAYRYESPSEHGEYEIVSFGADGVDGGEGEDMDIVSWAAVGQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 4e-18 42
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-18 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG2 YP_002604271.1 protein GspG2 VFG0180 Protein 5e-17 43
gspG2 YP_002604271.1 protein GspG2 VFG1871 Protein 8e-18 42
gspG2 YP_002604271.1 protein GspG2 VFG2050 Protein 9e-19 42