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Name : capD1 (HRM2_29750) Accession : YP_002604222.1 Strain : Desulfobacterium autotrophicum HRM2 Genome accession: NC_012108 Putative virulence/resistance : Virulence Product : protein CapD1 Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 3380794 - 3381855 bp Length : 1062 bp Strand : - Note : capsular polysaccharide biosynthesis protein CapD1 DNA sequence : ATGTGGAGAATGAATCTGCCTTTCCCCCAAATTAGGGGCAACCCAAATGGAATAAGTAAAATAATGAAAATAATGATTAC AGGAGCCGCAGGATTTATCGGTTTTTTCTTGGGTAAAAAACTCCTGGAAAATGGTCACACGGTGTTTGGGGTGGACAATC TCAACGATTATTACGAGGTCGCCTTGAAAAAGGGACGGCTGGAGATTTTAAACCGTTTTGATAGCTTTTCATTTGAACGG CTGGATATTTCCGATAGAAGCGGGGTTGAACGATTGTTTGGTGCCAACCGCTTTGACGTGGTGGTCAATCTTGCGGCCCA GGCAGGGGTGCGTTACAGCATAGACAACCCCCATGCCTATGTGGATTCAAATCTTGTGGGGTTTGCTAATATCCTTGAGG GGTGCCGCCACGGCCGGGTGGGGCACCTGGTTTACGCCTCCTCAAGTTCAGTCTATGGCCAGAACAAAAAAATGCCTTTT TCCGTCACAGATTCGGTGGATCATCCGGTGTCTTTGTATGCTGCCACAAAAAAATCCAACGAACTCATGGCCCATGCCTA TGCCCATCTCTATGGGATTCCCATGACGGGATTGCGGTTTTTCACGGTGTATGGTCCCTGGGGCCGTCCGGACATGGCCT ACTTTAAGTTCACCCGGGCCATTCTTGCCGGAGAGCCCATTGATGTGTATAACCACGGCAACATGCGCCGGGATTTTACC TATATTGATGATATTGTCAAGGGCGTGGTGAAAGTGATGGAAAAACCGCCGGTGCCGGGAGAGTCCCTGGCCGACAGTGG CACCTCTGCCCCATACCGGCTCTACAATATTGGAAACAACCAACCCGTGGAACTGGGTCATTTTATCGAGGTCCTGGAAA AACATCTTGGGCAAAAGGCTGTAAAAAACATGCTCCCCATGCAGCCGGGAGACGTACCTGAAACCTATGCCGATATTGAA ACCCTTGTACGGGATACAGGGTTTACCCCCGAGACATCCATTGACGAGGGCCTGGGTCGTTTTGTTCAGTGGTATCGAAA ATTTTATAGGATATTTGAATGA Protein sequence : MWRMNLPFPQIRGNPNGISKIMKIMITGAAGFIGFFLGKKLLENGHTVFGVDNLNDYYEVALKKGRLEILNRFDSFSFER LDISDRSGVERLFGANRFDVVVNLAAQAGVRYSIDNPHAYVDSNLVGFANILEGCRHGRVGHLVYASSSSVYGQNKKMPF SVTDSVDHPVSLYAATKKSNELMAHAYAHLYGIPMTGLRFFTVYGPWGRPDMAYFKFTRAILAGEPIDVYNHGNMRRDFT YIDDIVKGVVKVMEKPPVPGESLADSGTSAPYRLYNIGNNQPVELGHFIEVLEKHLGQKAVKNMLPMQPGDVPETYADIE TLVRDTGFTPETSIDEGLGRFVQWYRKFYRIFE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-97 | 58 |
