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Name : clpB (HRM2_25080) Accession : YP_002603766.1 Strain : Desulfobacterium autotrophicum HRM2 Genome accession: NC_012108 Putative virulence/resistance : Virulence Product : chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2863209 - 2865788 bp Length : 2580 bp Strand : + Note : ATP-dependent two-component protease ClpB (ATP-binding-N/ATPAse-C) DNA sequence : ATGAAATTTGACAAACTCACCATCAAGTCCCAGGAATTGATCCAGACAGCCCATGACCTGGCACTTAGAAAAAACAATCA GGCCATTGATCCCGTGCATTTCCTGAAGGCCATTCTGCTGGATGACCAGGGAATGTCCACGGCCATCCTCAATAAAATCG GTGCTTCAACCGACAATCTCATGACCTTTACCGACCAGGCCATTGATGCCCTTGCAAAGGTGGAGGGGGGAGGGGATCTT TTTTTATCGGTTCCTTCAAAAAAGATCCTGGATACCGCCTTTGTTGAGGCAGAGGGTATGAAGGATCAGTATGTGAGCCA GGAACATATCCTTCTTGCCCTTTGCATTGCCAAGGACAAGCCCCGTGAACTCTTGAACAAAGAGGGGGTCACCAAGGATA AAATCCTGACCGTTCTAAAGGAGATGCGGGGGGGCCAGACCATTGATTCGCCCAATCCTGAGAATACCTTCCAGGCCCTT GAAAAGTACGGCAGGGACTTGACCGAACTTGCCCGACTGGGAAAGCTTGACCCGGTCATCGGAAGGGACGATGAGATCCG ACGGGTGGTCCAGGTGCTTTCAAGGCGACGTAAAAACAATCCTGTGCTCATTGGCGAACCTGGCGTTGGAAAAACCGCCA TCATCGAAGGGCTTGCCCAGCGAATCGTTGCTGGCGATGTCTCTGAAACCCTGAGAAATCGACGGGTAGTCGCCCTGGAC ATGGGAGCGCTTCTTGCCGGTGCAAAGTTCAGGGGTGAATTTGAAGAACGGCTCAAGGCCGTATTAAAAGAGGTGGAACG GGCTGAAGGTCAGGTGGTCCTGTTTATTGATGAGCTCCACACCGTGGTTGGTGCCGGCGCATCTGAAGGATCGGTGGACG CTTCTAACATGCTCAAACCTTCGCTTGCCAGGGGAACCCTGCGATGTATTGGTGCGACAACCCTTAACGAATACCGTCGT TACATTGAAAAGGATGCGGCTCTGGAGCGTCGATTCCAGCCGATTCTGGCAAAGGAACCCACGGTTGAAGACACGATTTC CATCCTCAGGGGCTTAAAGGAAAAGTATGAGGTGTACCATGGGATAAGGATCAAGGATTCGGCCCTTGTGGCAGCAGCCA CCCTGTCAAAACGCTATATCACGGACCGTTTCCTGCCGGACAAGGCCATAGATCTCATTGACGAATGCGCCTCAAGACTC AGGATCGAAATCGACACCATGCCCGTTGCCATTGACGAACTCCAGCGACGGATGGTCCAGATCGAAATAGAACGCCAGGG GCTGAAAAAAGAGACCGACCCGTCGTCAAAATCCCGGAAAGAGAAACTGGATCGGGATCTTGCCGAGATCAACGAGGAAA TCCGACCCATGCGGCTCCATTGGGAAAATGAAAAACGGCTGATCCAGGAAATTGGCAAGATCCGGGAAGAGATCGACAAT GCTGTAACCCTGGCAAAGCGTGCCGAGCGTGAGGGTGATCTTGCCCGTGTGGCAAAAATTCGGTATTCAACCCTTGCCGA GTTCCAGACCCAACTGGACAAGAAAAAAGCTGATTTAAGGCTCCTCCAGGCCGAGCGCAGAATGCTCAAGGAGGATGTGG AAGAGTCAGACATTGCCGAAGTGGTTTCCTCGTGGACCCATATCCCGGTTGCCACCATGCTCAAGGGTGAACGCGAAAAA CTGATTCACATGGAAGAGGCCCTGGAACAAAGGGTTATCGGTCAGAAAGACGCCATCAAGGCCGTTTCAGATGCCGTGCG CCGGGCCCGATCTGGGCTAAAACCCCAGGATCGGCCCATTGGGACCTTTATCTTCATGGGGCCCACAGGTGTGGGTAAGA CAGAGTTGACAAAGGCCGTTGCCGAATTCATCTTTAATACAAAGAATGCCATGGTAAGGATTGATATGTCCGAATACATG GAAAAACATTCGGTGGCAAGACTGATCGGTGCCCCTCCGGGTTATGTGGGATACGAAGAGGGTGGTTATCTCACCGAGGC TGTTCGGCGTCAGCCCTATTCCGTTGTTTTGTTTGACGAAATTGAAAAGGCCCATCCCGATGTATTCAACGTGCTGCTCC AGGTGTTAGATGACGGACGAATGACCGACGGCCATGGCAGAACGGTGGATTTTACCAACACCATTCTCATCATGACCTCC AATGTGGGGTCCCGCATGATCCAGGAATCAGGGGGGAAAGATATCCAGGACAAGATCAACCAGGCCCTGTCCCAGACTTT TAAACCTGAATTTTTGAACCGTATCGATGAGATCATCGTATTCCACGGACTTGAGATGGAGCACATCAGGGCCATCGCAT CCATCCAGATCCAGCACCTGAACCAGCGGCTTGAAGCAAAAAAGATAGCCATTACCCTTGACGAGGCCGCCATGGCATTC ATAGCACAAAAGGGGTTTGATCCTGTGTTTGGCGCACGTCCCCTCAGGCGAGTGATTCAGCAGGAGATCGAAAATCCGCT GTCCCTTGAAATTTTAAAGGGAACGGTGGTTGAAGGCCAGCAGGTAACCTTTACCGTTGACCCAGGGAATACAAAACTTG TCCTGGGTCCCCGGTCATAG Protein sequence : MKFDKLTIKSQELIQTAHDLALRKNNQAIDPVHFLKAILLDDQGMSTAILNKIGASTDNLMTFTDQAIDALAKVEGGGDL FLSVPSKKILDTAFVEAEGMKDQYVSQEHILLALCIAKDKPRELLNKEGVTKDKILTVLKEMRGGQTIDSPNPENTFQAL EKYGRDLTELARLGKLDPVIGRDDEIRRVVQVLSRRRKNNPVLIGEPGVGKTAIIEGLAQRIVAGDVSETLRNRRVVALD MGALLAGAKFRGEFEERLKAVLKEVERAEGQVVLFIDELHTVVGAGASEGSVDASNMLKPSLARGTLRCIGATTLNEYRR YIEKDAALERRFQPILAKEPTVEDTISILRGLKEKYEVYHGIRIKDSALVAAATLSKRYITDRFLPDKAIDLIDECASRL RIEIDTMPVAIDELQRRMVQIEIERQGLKKETDPSSKSRKEKLDRDLAEINEEIRPMRLHWENEKRLIQEIGKIREEIDN AVTLAKRAEREGDLARVAKIRYSTLAEFQTQLDKKKADLRLLQAERRMLKEDVEESDIAEVVSSWTHIPVATMLKGEREK LIHMEEALEQRVIGQKDAIKAVSDAVRRARSGLKPQDRPIGTFIFMGPTGVGKTELTKAVAEFIFNTKNAMVRIDMSEYM EKHSVARLIGAPPGYVGYEEGGYLTEAVRRQPYSVVLFDEIEKAHPDVFNVLLQVLDDGRMTDGHGRTVDFTNTILIMTS NVGSRMIQESGGKDIQDKINQALSQTFKPEFLNRIDEIIVFHGLEMEHIRAIASIQIQHLNQRLEAKKIAITLDEAAMAF IAQKGFDPVFGARPLRRVIQQEIENPLSLEILKGTVVEGQQVTFTVDPGNTKLVLGPRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 8e-105 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_002603766.1 | chaperone ClpB | VFG2076 | Protein | 1e-110 | 41 |
