Gene Information

Name : tpxA (HRM2_23740)
Accession : YP_002603633.1
Strain : Desulfobacterium autotrophicum HRM2
Genome accession: NC_012108
Putative virulence/resistance : Virulence
Product : TpxA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : 1.11.1.-
Position : 2713280 - 2713780 bp
Length : 501 bp
Strand : -
Note : thiol peroxidase TpxA (Scavengase P20)

DNA sequence : 
ATGGCCAAAACCCAATTAGCAGGAAACAATGTTATTCTTGCAGGCGATTTTCCAGGTAAAGGCCTTCCTGCGAAAAACTT
TACAGCCGTTCTCCAGGATCTTTCCGAGACCACCCTTGACGCATTTAAAGGAACAAAGGTGGTCCTTAATGTTTTTCCAA
GCATTGACACTGATGTTTGCGCAACAAGTGTCAGGACCTTCAACCAAAAGGCTTCAGCCATTGGCAATACCAAGGTGGTC
TGCCTCTCCTTTGATCTTCCCTTTGCCCTTAAACGTTTCTGCGGTGCAGAGGGCATTGAAAATGTCCTGACCGCATCCCT
GTTTCGAAACCCCGAATTTGCCACCGATTACGGGGTGCTCATTACCGACGGCCCCCTCAAGGGACTCGCTGCCAGGGCTG
TTTTTGTTGTGGATGAGGCGGGCAAAATCATCCATGCTCAGCTTGTGGATGACATCACCCATGAACCCGATTATGATGCA
GCCTTGGCTGCCTTAAAATAA

Protein sequence : 
MAKTQLAGNNVILAGDFPGKGLPAKNFTAVLQDLSETTLDAFKGTKVVLNVFPSIDTDVCATSVRTFNQKASAIGNTKVV
CLSFDLPFALKRFCGAEGIENVLTASLFRNPEFATDYGVLITDGPLKGLAARAVFVVDEAGKIIHAQLVDDITHEPDYDA
ALAALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-32 46
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 2e-32 46
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-32 46
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 1e-32 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpxA YP_002603633.1 TpxA VFG0087 Protein 5e-33 46