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Name : lysS1 (HRM2_22380) Accession : YP_002603500.1 Strain : Desulfobacterium autotrophicum HRM2 Genome accession: NC_012108 Putative virulence/resistance : Virulence Product : protein LysS1 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 2531571 - 2533085 bp Length : 1515 bp Strand : + Note : lysyl-tRNA synthetase LysS (Lysine--tRNA ligase) (LysRS) DNA sequence : TTGATCATTAACCCAAATATAAAAGACAGTGAACGTATGGATGAATCAAACGCACTATTGACGGCAAGACAAGAGAAGCT AAAGGAGATCCGGGATACCGGTATCCCTCTCTATCCCAATGACTTTAAGGTTTCCCACACCGTGGAAGCGTTGCAAAACG TCATTGCTGAAAATCCCGAAGGGCTTGGGGAGAATGGACCTGTGTTTTCGGTCGCAGGAAGGATGATGGCGGTCAACAAG TTTGGAAAGTCGTCGTTTATCCGTTTCAAGGACAGGACTGGCCAGATTCAGGCCTATCTTCAGAAAAACAGGGTCGGTGA TGGGGTTTACGATCTGTTTAAAAAACTTGATATCGGCGATTTTGTCGGAATTACCGGCTCACTGTTCCAGACAAGAACCG GCGAGTGGACCCTTTTGGCTGAAAACTTTCGGCTTCTGTCCAAATCCATGCGGCCCCTGCCTGAAAAATTCCACGGCATC AAGGATCCGGAAAAAAGATACCGCCAGCGTTACCTTGACCTTATCATGAACAAGGAGGCAAGGGCTATTTTTACCCGGCG CAGTAAAACCATACGCCTGATGCGGACTTTTTTTGAACAAAGGGATTTCATGGAGGTTGAAACACCCATGATGCAGCCCG TTGCCGGAGGTGCTGAAGCGACTCCTTTCAAGACCTGGCACAACGCCCTTGGCATGGAGCTATTTTTGCGGATTGCTCCG GAACTTTACCTGAAGCGGCTGGTTGTGGGTGGATTTGAACGGGTATTTGAGATCAACCGTAATTTCAGGAATGAAGGCGT GTCTACCCGGCACAATCCTGAGTTTACCATGGTTGAGTTTTACCAGGCCTACGCCACCTATGAAGACCTCATGGACATGA CCGAGGTAATGTTCAGGCACTTAGCGCTTGAAGTGACAGGATCTGAAACCATCCAGTATCAGGGAGACTCCATTGATTTT TCAAAATCCTGGGAGCGTCTTCCCATGATGGAATCCCTGGTCAAGATCGGCGGCGTTGACCCGGCCATCCTTGAAGACAG GACGGCCCTTCGTGCCTTTGCAGAAAAGAACAGCATTAATATGACCGACCAGGATCACCACGGAAAGATACTCACCAAGC TTTTTGATCTGCTGGTGGAACCAAAGCTGATTCAGCCGACCTTTATCACGGGATATCCCGTGGAAGTGTCGCCCCTTTCC AGAAAAAGTGAGGCAAACCAAGAGCTTACAGATCGGTTTGAGCTGTTCATTGCGGGCCGGGAGATTGCCAACGGATTCTC TGAGATCAATGATCCGGTTGACCAGCATGAACGTTTCCTTGGTCAGGCAGCCAAACGAAGTAAAGGCGATGTGGAGGCCC ATGTCATGGATACCGACTATGTGGAGGCTCTGGAGTACGGCATGCCGCCCACGGCCGGTGAAGGTATTGGCATTGACCGA CTTATAATGCTTTTAACAGATTCTGCCTCCATTCGAGAGGTGATTCTGTTTCCCCACATGAAAAATATTGTCTGA Protein sequence : MIINPNIKDSERMDESNALLTARQEKLKEIRDTGIPLYPNDFKVSHTVEALQNVIAENPEGLGENGPVFSVAGRMMAVNK FGKSSFIRFKDRTGQIQAYLQKNRVGDGVYDLFKKLDIGDFVGITGSLFQTRTGEWTLLAENFRLLSKSMRPLPEKFHGI KDPEKRYRQRYLDLIMNKEARAIFTRRSKTIRLMRTFFEQRDFMEVETPMMQPVAGGAEATPFKTWHNALGMELFLRIAP ELYLKRLVVGGFERVFEINRNFRNEGVSTRHNPEFTMVEFYQAYATYEDLMDMTEVMFRHLALEVTGSETIQYQGDSIDF SKSWERLPMMESLVKIGGVDPAILEDRTALRAFAEKNSINMTDQDHHGKILTKLFDLLVEPKLIQPTFITGYPVEVSPLS RKSEANQELTDRFELFIAGREIANGFSEINDPVDQHERFLGQAAKRSKGDVEAHVMDTDYVEALEYGMPPTAGEGIGIDR LIMLLTDSASIREVILFPHMKNIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-112 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS1 | YP_002603500.1 | protein LysS1 | VFG1668 | Protein | 7e-113 | 49 |
