|
Name : HRM2_20620 (HRM2_20620) Accession : YP_002603325.1 Strain : Desulfobacterium autotrophicum HRM2 Genome accession: NC_012108 Putative virulence/resistance : Unknown Product : ATP-dependent DNA excision repair protein (helicase superfamily) Function : - COG functional category : K : Transcription COG ID : COG1061 EC number : - Position : 2316057 - 2317994 bp Length : 1938 bp Strand : - Note : - DNA sequence : ATGCCCAATCTTGTTGATGTTACCTATGCTCAAACGGGAAAAAGCCTCTCCATTAATAATATGGGAATGCGTGAGATGCA AGCACGTGCCTTTGAAGCGAGAAACGCACAATATCTATTATTAAAAGCCCCACCCGCCTCAGGGAAATCTCGGGCTTTAA TGTTCCTAGGCCTGGATAAGCTTTTTAACCAGGGAATCAAAAAAGTCATTGTTGCAGTTCCAGAACGTTCTATCGGTAGT TCCTTTGATAATACCGATCTCACCACTTATGGTTTTTTTGCAGATTGGGATTTCAATTCAGATTATAACCTTTGTACCCC AGGCGGAGACTCCAGTAAGGTTACTGCATTTAAAAATTTTCTTAGCGATTCCAGTGAGACCATTTTAATCTGTACTCATG CAACCTTGCGTTTTGCCTACGATGCTGTTGAGGAGTCGGTCTTTAATAATATTCTACTGGCTATAGATGAGTTTCATCAT GTCTCTGCCGATGGTGAAAATCGACTGGGTGAGGTGTTACGCTCCATTATGAATAACACTGCAGCTCATATCATTGCTAT GACGGGCTCTTATTTTCGGGGTGACAGTGTGCCGGTTTTGTTGCCAGAAGATGAGGCAAGGTTTTCTAAAGTCACCTACA ACTATTATGAACAACTTAATGGTTATACTAATCTAAAAACGTTGGGAATAGGTTACCACTTCTATCAAGGCCGGTATCTA AGCGCCATTAATGAGGTGTTGGATACTGACAAAAAAACCATTTTACACATTCCCAACGTAAACGCCGGTGAATCCACTAA AGACAAACATAATGAGGTGGATTCCATACTCGATATTATTGGTACAGTGACCCGTCAAGATACTGAGACTGGTGTAATTT ATGTAAAACGTCATAGTGACAGCAAGACGATTACGGTAGCTGATCTAGTCAACGATAATCCTAAAGACCGTGATAAAATT GTTGCTTATCTACGCCAAATGAAGAATGTCGATGATATGGATTTAATCATTGCTTTAGGTATGGCGAAGGAAGGCTTTGA TTGGCCATTTTGTGAACATGCTCTCACTGTTGGATATAGGGGCTCATTGACTGAGATTATACAGATTATTGGACGAGCCA CCCGCGATAGCAATAATAAAACCCATGCTCAATTTACCAACCTGATTGCCCAGCCAGATGCAGCCGATGATCAGGTGAAA CTCTCTGTCAATAATATGCTCAAGGCTATTACTGCTTCTCTGTTAATGGAGCAGGTCCTTGCCCCGAATTTTAAATTCAA AACAAGACGCTTTGACGATGATGAAAATGAAGAGGGAACTATAAAGATTCGGGGATTCAAAGAACCCAGCTCGCAACGGG TGAAGGATATTGTGGAGTCAGACTTAAATGATCTTAAAGCTGCTATCCTGCAGGACAGTAAAATACTTCAAGCATTGCCA GGGGAATTTATTGACCCTGAAGTAATCAACAAGGTTATGATCCCCAAGGTAATACAGACTAAATATCCAGGGTTAAGCGC TAAAGAGGTAGAGGAAGTTCGCCAACATGTGGTTGCAGATTCTGCCATCAAGAATGGCGAAATCAAGGAGGTTGGTGATA AACGCTTTGTTCGGATGGCAGGGAAATTTGTTAATATTGAAGAGCTTCATATTGATCTAATTGACCAGATTAATCCATTC CAGAAGGCATTTGAAGTTCTATCTAAATCAGTAACTGCGAAACTATTAAAGGTGATTCAGGAAACAATTGATGCCGGTCG TATCCTGATGACAGATGAAGAGGCCGTGATTCTTTATCGAGACAAAATTGGACCTTTTATCAAGGTCCATGGGCGGGAAC CTAATATGAATTCAACGGACCCACTGGAAAGAAGACAGGCCGAGGCCTTAGTCTATCTTAGAAACAAGAAACGACAAATG GCAAGCGAGAATGGTTAA Protein sequence : MPNLVDVTYAQTGKSLSINNMGMREMQARAFEARNAQYLLLKAPPASGKSRALMFLGLDKLFNQGIKKVIVAVPERSIGS SFDNTDLTTYGFFADWDFNSDYNLCTPGGDSSKVTAFKNFLSDSSETILICTHATLRFAYDAVEESVFNNILLAIDEFHH VSADGENRLGEVLRSIMNNTAAHIIAMTGSYFRGDSVPVLLPEDEARFSKVTYNYYEQLNGYTNLKTLGIGYHFYQGRYL SAINEVLDTDKKTILHIPNVNAGESTKDKHNEVDSILDIIGTVTRQDTETGVIYVKRHSDSKTITVADLVNDNPKDRDKI VAYLRQMKNVDDMDLIIALGMAKEGFDWPFCEHALTVGYRGSLTEIIQIIGRATRDSNNKTHAQFTNLIAQPDAADDQVK LSVNNMLKAITASLLMEQVLAPNFKFKTRRFDDDENEEGTIKIRGFKEPSSQRVKDIVESDLNDLKAAILQDSKILQALP GEFIDPEVINKVMIPKVIQTKYPGLSAKEVEEVRQHVVADSAIKNGEIKEVGDKRFVRMAGKFVNIEELHIDLIDQINPF QKAFEVLSKSVTAKLLKVIQETIDAGRILMTDEEAVILYRDKIGPFIKVHGREPNMNSTDPLERRQAEALVYLRNKKRQM ASENG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0715_00996 | YP_008216144.1 | hypothetical protein | Not tested | AbaR27 | Protein | 1e-151 | 65 |
| CDPW8_0255 | YP_005141822.1 | putative ATP-dependent helicase | Not tested | Not named | Protein | 2e-131 | 55 |
