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Name : smpB (HRM2_19040) Accession : YP_002603169.1 Strain : Desulfobacterium autotrophicum HRM2 Genome accession: NC_012108 Putative virulence/resistance : Unknown Product : protein SmpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 2162655 - 2163119 bp Length : 465 bp Strand : + Note : ssrA-binding protein SmpB (tmRNA binding protein) DNA sequence : ATGACATCCGAACATATAAAGATCATAGCGACCAATAAAAAAGCAAGACACGACTACCATCTATCCGACGAGGTGGAGGC AGGCATTGTCTTGACGGGCACCGAGGTCAAGTCCATCCGGGATGGCAGGGTCACCATCAAGGATGCCTACGCAGAGATCA AGAATGGAGAGGTGTTTCTGCGCCAGCTTCACATCAACCCCTACGCCTTTGCATATTATGACAACCACGATCCCTTAAGG TCCAGAAAGCTGCTGCTCCACAACTATGAAATCAAACGGATGATCATAAAGACCAAGGAGCGGGGCTATACCATCATTCC CCTGAAGCTCTATTTTAAAAATGGGAAGGTCAAGGTTCAGATCGCCCTTGCCAAGGGCAAGAAGCTCTATGACAAGCGGG AGAGCATCAAGGAGCGGGAAGTGAACCGGGAGCTTGACCGGGTAAAGAAAAAGTATCAGGATTGA Protein sequence : MTSEHIKIIATNKKARHDYHLSDEVEAGIVLTGTEVKSIRDGRVTIKDAYAEIKNGEVFLRQLHINPYAFAYYDNHDPLR SRKLLLHNYEIKRMIIKTKERGYTIIPLKLYFKNGKVKVQIALAKGKKLYDKRESIKEREVNRELDRVKKKYQD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 2e-35 | 56 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 8e-33 | 54 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 1e-22 | 45 |
