Gene Information

Name : HRM2_18530 (HRM2_18530)
Accession : YP_002603119.1
Strain : Desulfobacterium autotrophicum HRM2
Genome accession: NC_012108
Putative virulence/resistance : Unknown
Product : transcriptional accessory protein (S1 RNA binding domain-containing protein)
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 2105477 - 2107588 bp
Length : 2112 bp
Strand : -
Note : -

DNA sequence :
ATGATAACCACCATTGCCCGGGATCTTGACCTTACACCGGCCCAGGTACAAACCATTGCCAATTTTTTCGACCAGGGTGC
CACCATCCCCTTTATTGCCCGCTACCGAAAAGAACAGACCGGCTCCCTTGACGAGGTCGTGATTGCCGAAATCCGGGACA
GGATCACAAAATTCAAGGAATTTTCTGCAAGACAGCAGGTCATTATTGCCTCCCTTGAAGAAAGAGACCTCATGACCGAA
AACCTCAGGCAAGCCATTAACCGGGCCACAACAAAAGCAGAACTTGAGGATCTTTTTGAAAAATTCAGGCCAAAAAGAAA
GACAAGGGCCCAGACGGCCCGGGAACAGGGTTTAGAGCCCCTGGCCCTCACACTTTTAAAACAACGGGACAAGGATCCCC
AAATCGAAGCCCTGCCCTTTGTGGATACAGCTAAAGGGGTTGAAACCGTTGAACAGGCCCTTGCCGGGGCAAGGGATATC
CTGGCCGAAACCTTTAACGAGGATCCAACCCTTCGAGCCAGGGTCCGCAAACTATTTGAATCAAAGGCCATCCTAAGCGC
CCGGGTCAAAAAGGGCAAAGAAGCTGAAGGCGCAAAATTCAGGGACTATTTCGACTGGTCGGAAAGCGCGGCAAAAAGCC
CGTCCCACAGGATTCTTGCCATGTTCAGGGGGGAAGCTGCCGCCATCCTTACCGTCCATGTACTTCCACCCGAAGAAACA
GCCCTTGCCATCATCGAACAGCGGATTGTTAAAAACAGCACCCGGGCAGCCCTGGAGGTCAAAGCCGCCATCAAGGATGC
CTACAAACGGCTCATGGGAAAATCCCTTGAAAAGGAGACCATGGCAAATCTGAAACAAAGGGCAGACCAGGAGGCCATCG
GGGTGTTTGCCGGCAACATCCGAGAACTGCTTCTCTTTTCCCCCCTTGGGCAGAAACGGGTACTGGCCATTGATCCTGGT
TTCAGGACCGGATGCAAAATCGTCTGTCTCGACCAGCAGGGCACCCTCGTCCACCATGGGGTGATCTATCCGTTTTCAGA
TTCGGACAAGGCCGCAAAAACCCTGAAGAAATTGACCAGAGAACATGAAACAGAAGCCATAGCCATTGGCAATGGCACGG
CTGGAAGGGAGACCGAAGCCTTTGTCCGGCAGGCCGGACTTGGAGACAAGATCCAGACAATCATGGTTGACGAAAGTGGT
GCATCCATCTACTCGGCATCACAAATCGCAAGGGACGAATTTCCGGACCAGGACATCACCGTACGGGGAGCCGTTTCCAT
TGGCCGCCGCCTCATGGATCCCCTGGCCGAACTTGTAAAGATCGACCCTAAATCCATTGGGGTGGGCCAGTACCAGCACG
ATGTGGATCAAAAAGCACTTCAAACGACGCTGGATGATGTCATCTCATTCTGCGTAAACCGGGTCGGTGTGGAGGTGAAC
ACGGCAAGCGCTGCCCTTCTCACCCACGTGGCAGGACTCAACACGACCATTGCAGCCAATATCATCAATTTCCGAAAAGA
GAACGGCCCCTTTACCACGCGCCGGGATCTTTTAAAAGTGCCCCGCTTAGGGCCCAGGGCCTTTGAGCAATCTGCCGGTT
TTCTAAGAATTTCAGACGGCAAAAACCCCCTTGACCGAAGCGGCATCCACCCGGAGTCCTACACCATTGTGGAGTCCATG
GCAAAGGACAACGGTCTTACCGTTAAGGCCCTTGTGGGCAACCAACCCCTGGTAAAAGGCATCGACCTTACCCCCTATTG
CACTGACACAAGGGGAATGGTTACCCTTGAAGATATAGCAGCCGAACTTGCAAGACCCGGCAGAGACCCAAGGGAAACCT
TCAAGCCCTTTGAGTTTGATGACAACATCCACGAGATCAAGGATCTTGTTCCCGGCATGAGGGTACCGGGTCTTGTGACC
AATGTGACGGCCTTTGGAGCCTTTGTGGACATCGGCGTTCACCAGGATGGTCTGGTTCACATCAGCCAGCTTGCCGACCG
GTTTGTCAAAGATCCCAACGAGGTGGTCAAGGTTCGCCAGCAGGTAACCGTCACCGTGCTCGAGGTGGACATAAATCGAC
AACGAATTTCCCTTTCCATGCGGAATTCATGA

Protein sequence :
MITTIARDLDLTPAQVQTIANFFDQGATIPFIARYRKEQTGSLDEVVIAEIRDRITKFKEFSARQQVIIASLEERDLMTE
NLRQAINRATTKAELEDLFEKFRPKRKTRAQTAREQGLEPLALTLLKQRDKDPQIEALPFVDTAKGVETVEQALAGARDI
LAETFNEDPTLRARVRKLFESKAILSARVKKGKEAEGAKFRDYFDWSESAAKSPSHRILAMFRGEAAAILTVHVLPPEET
ALAIIEQRIVKNSTRAALEVKAAIKDAYKRLMGKSLEKETMANLKQRADQEAIGVFAGNIRELLLFSPLGQKRVLAIDPG
FRTGCKIVCLDQQGTLVHHGVIYPFSDSDKAAKTLKKLTREHETEAIAIGNGTAGRETEAFVRQAGLGDKIQTIMVDESG
ASIYSASQIARDEFPDQDITVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQKALQTTLDDVISFCVNRVGVEVN
TASAALLTHVAGLNTTIAANIINFRKENGPFTTRRDLLKVPRLGPRAFEQSAGFLRISDGKNPLDRSGIHPESYTIVESM
AKDNGLTVKALVGNQPLVKGIDLTPYCTDTRGMVTLEDIAAELARPGRDPRETFKPFEFDDNIHEIKDLVPGMRVPGLVT
NVTAFGAFVDIGVHQDGLVHISQLADRFVKDPNEVVKVRQQVTVTVLEVDINRQRISLSMRNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 2e-152 47