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Name : kdsB (HRM2_18260) Accession : YP_002603089.1 Strain : Desulfobacterium autotrophicum HRM2 Genome accession: NC_012108 Putative virulence/resistance : Virulence Product : protein KdsB Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 2077272 - 2078006 bp Length : 735 bp Strand : - Note : 3-deoxy-manno-octulosonate cytidylyltransferase KdsB (CMP-KDO synthetase) DNA sequence : ATGACGATTGCAATAATACCTTCACGATATGCCTCCAAACGATTTAATGGAAAACCACTGGCCCTGGTGGCTGGAAAGCC CATGATCCAGCGGGTATATGAACAGGCCATACAGGCCGGCTCCATTGACCGGGTAATGGTGGCAACCGACAACGAACAGA TTTTTGACACGGTCACTGCCTTTGGTGGAGAGGCCATTATGACCCAGGGGGACCTCAGATCCGGCACGGACCGGGTGTGG AACGCCTGCAGGCAATTGCCCCTGGAACCCGACGAGGTGATCATCAACATCCAGGGAGACCAGCCCATTTTTTCACCTGA ATGCCTGGACCAGCTGACTGCCCCTTTTGACACTGACAAAACCCTTGGCATGTCGACCCTGGCCATTGAAATAACCGATC CCCGGGACTTGACCGACCCATCTGCGGTAAAGGTCACCCTTAACCAGAAGGGCTTTGCCCTTTATTTTTCCCGATCCCAG ATTCCCTTTCCAAGGGACGGCAAATCCCAGATACCCTTTTACCGTCACCTGGGTTTTTATGCCTATCGAAAATCGTTTCT TGAAATGTTCACCAAGCTTGGGAAAAGCCCCCTTGAAGAGACAGAAAAACTTGAACAGCTAAGGGTGCTGGAGTATGGAT ATGACATCAAAGTGGTTATCACCACCTATGATTCACCCAGCGTGGACACACCCGACGATATTGACCGTATTGAGGCAAAG TTTTTTACCCCATGA Protein sequence : MTIAIIPSRYASKRFNGKPLALVAGKPMIQRVYEQAIQAGSIDRVMVATDNEQIFDTVTAFGGEAIMTQGDLRSGTDRVW NACRQLPLEPDEVIINIQGDQPIFSPECLDQLTAPFDTDKTLGMSTLAIEITDPRDLTDPSAVKVTLNQKGFALYFSRSQ IPFPRDGKSQIPFYRHLGFYAYRKSFLEMFTKLGKSPLEETEKLEQLRVLEYGYDIKVVITTYDSPSVDTPDDIDRIEAK FFTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 3e-39 | 41 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 2e-39 | 41 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 1e-39 | 41 |
