Gene Information

Name : gspG1 (HRM2_11400)
Accession : YP_002602416.1
Strain : Desulfobacterium autotrophicum HRM2
Genome accession: NC_012108
Putative virulence/resistance : Virulence
Product : protein GspG1
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 1293830 - 1294273 bp
Length : 444 bp
Strand : -
Note : general secretion pathway protein G [precursor]

DNA sequence :
ATGAAATTGCTGAAAACAGACACAAGGGGCTTTACCCTGATCGAGCTTATGGTTGTAGTGGTAATTCTGGGAATTCTGGC
AAGTCTTATCGTACCAAGACTCATGGGAAGAACGGACGAGGCAAAACAGGTCAAGGCCCAGGTGGACATCGCAACCATTG
AGACGGCGCTCAAGCTTTACCGGCTGGACAACGGCAACTATCCCTCCACAGAACAGGGGCTGATGGCCCTTGTGGAACAG
CCCACATCTGAACCGGTTCCTGCAAAATGGAATGAGGGCGGCTACCTTGAAAAGGGGAAAATGCCTAAAGATCCCTGGAG
CAGGGAATACCTCTATCTGTGCCCGGGAGTCCATGGTGACTTTGACATTATCTCCTATGGTGGTGACGGAACTCCTGGGG
GAGAAGGCAAGGACAGTGACATCAATAGCTGGGAACTTGAATAA

Protein sequence :
MKLLKTDTRGFTLIELMVVVVILGILASLIVPRLMGRTDEAKQVKAQVDIATIETALKLYRLDNGNYPSTEQGLMALVEQ
PTSEPVPAKWNEGGYLEKGKMPKDPWSREYLYLCPGVHGDFDIISYGGDGTPGGEGKDSDINSWELE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 2e-29 52
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-29 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG1 YP_002602416.1 protein GspG1 VFG1871 Protein 2e-37 61
gspG1 YP_002602416.1 protein GspG1 VFG0180 Protein 8e-32 55
gspG1 YP_002602416.1 protein GspG1 VFG2050 Protein 4e-30 52