Gene Information

Name : tpx (HRM2_10300)
Accession : YP_002602306.1
Strain : Desulfobacterium autotrophicum HRM2
Genome accession: NC_012108
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : 1.11.1.-
Position : 1176023 - 1176622 bp
Length : 600 bp
Strand : +
Note : thiol peroxidase Tpx

DNA sequence : 
ATGGCTAAGTTTACAATTGGTGGTAACCCGGCAAATACGTCAGGGGATTTACCCCAAGTTGGAGAAAAAGCACCTGAATT
TCTGCTTACCAAAACAGATTTGACGGACATTTCGCTAAAGGATGTGGCGGGAAAAAAGGTGGTGCTGAACATTTTTCCAA
GCGTGGATACGCCGGTGTGCTCTGCGTCGGTCCGGCGTTTTAACAGTGAAATCAACAACTATGCAAACGCCGTTGTCCTC
TGTGTCTCCCTTGATCTGCCGTTTGCCCATTCCCGGTTCTGCGAAACCGAAGGGTTGAAGAATGTCATCCCGGTAACAGA
ACTCAGGAACAGGGATTTTGGCCGGGCCTACGGCCTTAGAATTGTTGACGGTCCCCTGGCTGGACTTCTGGCAAGGGGGG
TTGTGGTGATGGATGAACAAGGAACGGTGATTTTTTCAAAGCTTGTGCCGGAGCTTAAAACCGAACCGGACTATGAACCG
GTGCTGACGGTCCTTGGAAAAAGAGTCTCGGCTGAAAATGTATGTACCCAAACCTCCACGGCAGAACATTCAAGGCTCAA
CGAGAACGATGAACCCTGTGATGACGGAAGGGCTGGATGA

Protein sequence : 
MAKFTIGGNPANTSGDLPQVGEKAPEFLLTKTDLTDISLKDVAGKKVVLNIFPSVDTPVCSASVRRFNSEINNYANAVVL
CVSLDLPFAHSRFCETEGLKNVIPVTELRNRDFGRAYGLRIVDGPLAGLLARGVVVMDEQGTVIFSKLVPELKTEPDYEP
VLTVLGKRVSAENVCTQTSTAEHSRLNENDEPCDDGRAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 7e-31 45
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 7e-31 45
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 5e-31 45
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 5e-31 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_002602306.1 hypothetical protein VFG0087 Protein 2e-31 45