Gene Information

Name : Cla_a019 (Cla_a019)
Accession : YP_002576143.1
Strain :
Genome accession: NC_012040
Putative virulence/resistance : Virulence
Product : conjugal transfer protein VirB11
Function : -
COG functional category : N : Cell motility
COG ID : COG0630
EC number : -
Position : 22071 - 23072 bp
Length : 1002 bp
Strand : +
Note : similar to Campylobacter jejuni 81-176 pTet protein CmgB11 Pfam match to PF00437.11 GSPII_E

DNA sequence : 
ATGAGTAATTCAAGAACCCTAGAAAAATTAGCTAATGATTTTTTTGGAAAGCATTTGGCTAATTCCAGCGTAACTGAAAT
ATGCTACAACGGCAAAAAAAATATTTTCATACAAACTAATGATGGAAAATGGCAAGAAGAAACAAGTAAGTTAGATTATG
AAGCTTCTAAGTCGTTTGCTACTTCTTTAGCTTCTTTTAAAGAAGATAAGATAGATGAATCACGCCCTATCCTTTCTTGT
ATATTACATGGAGGTGAAAGGGTTCAGGTAGTAATTCCGCCAGCGACTAAAAAAGAGCATATTTCAATTACAATTAGAAA
ACCAAGTGAGAAAAGATTTTTAATACAAGATCATGTTAAAAGTGGTCTTTTTGAAGAAATAAAAACTGATCATTTTATAA
CAAATCCTTTGGATGAGGAGTTGAAAAAGCTTTATGAGGCTAAAAATTTTAAAGATTTTATTTGTAAAGCAGTAGAGTAT
GAAAAAAATATCATTATAGCAGGAGGTACAGGAAGCGGTAAAACAACTTTTATGAAAACTTTAATTGATTTTATTCCCAA
AGAACAAAGAATTATAACTATAGAAGATGTTGAAGAAATAAAATTTTATGAGCATAAAAATTTTGTACAACTTTTTTATC
CCAGTGAAGCTAAAAATGAAGATTTTTTAAATTCTGCAACTCTTTTAAAATCGTGTCTTAGAATGAAGCCTGATAGAATC
TTATTGGCAGAGCTTAGAGGTGCTGAAACTTATGATTTTATCAATGTTCTTTCTAGTGGGCATGGTGGTAGCATTACAAG
TTGCCATGCAGGAAGCACTTCTGAAACATTCGAGCGTTTGGCTTTGATGACTTTACAAAATACTCAAGGTCAAAAAATAC
CTTTTGAAAAAATACAAGATATGCTTAAAAATCTTATTGATGTAGTTGTCCATATTAGAGCTCATAATGGAAAAAGACAT
ATTAGTCAAATATATTTTAAAGAGATGAAGAATGGCAAATAA

Protein sequence : 
MSNSRTLEKLANDFFGKHLANSSVTEICYNGKKNIFIQTNDGKWQEETSKLDYEASKSFATSLASFKEDKIDESRPILSC
ILHGGERVQVVIPPATKKEHISITIRKPSEKRFLIQDHVKSGLFEEIKTDHFITNPLDEELKKLYEAKNFKDFICKAVEY
EKNIIIAGGTGSGKTTFMKTLIDFIPKEQRIITIEDVEEIKFYEHKNFVQLFYPSEAKNEDFLNSATLLKSCLRMKPDRI
LLAELRGAETYDFINVLSSGHGGSITSCHAGSTSETFERLALMTLQNTQGQKIPFEKIQDMLKNLIDVVVHIRAHNGKRH
ISQIYFKEMKNGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB11-2 YP_005779065.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-52 44
HP0525 BAD13831.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-52 44
virB11-2 YP_005775728.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-52 44
HP0525 BAD13941.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-52 44
virB11_1 NP_223192.1 cag island protein, DNA transfer protein Virulence cag PAI Protein 2e-52 44
HP0525 BAD13886.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-53 44
virB11-2 YP_005774544.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-53 44
HP0525 BAD13913.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-53 44
virB11-2 YP_005777269.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-52 44
HP0525 AAR03888.1 VirB11-like protein Virulence cag PAI Protein 2e-52 43
HP0525 BAD14024.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-52 43
HP0525 NP_207321.1 virB11-like protein Virulence cag PAI Protein 2e-52 43
HP0525 AAR03948.1 VirB11-like protein Virulence cag PAI Protein 2e-52 43
HP0525 AAR03859.1 VirB11-like protein Virulence cag PAI Protein 2e-52 43
virB11-4 YP_003728739.1 cag pathogenicity island protein alpha Virulence cag PAI Protein 2e-52 43
virB11 AGC69807.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-52 43
HP0525 BAD13777.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-52 43
HP0525 BAD13804.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-52 43
HP0525 BAD14050.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-52 43
HP0525 AAR03917.1 VirB11-like protein Virulence cag PAI Protein 2e-52 43
HP0525 BAD13996.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-52 43
cag-alfa AAF80196.1 Cag-alfa Virulence cag PAI Protein 2e-52 43
HP0525 BAD13968.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-51 42
HP0525 BAD13858.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-52 42
unnamed AAP70289.1 Pilx11/VirB11-like protein Not tested HPI Protein 3e-58 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cla_a019 YP_002576143.1 conjugal transfer protein VirB11 VFG2218 Protein 2e-63 49
Cla_a019 YP_002576143.1 conjugal transfer protein VirB11 VFG0285 Protein 9e-53 43