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Name : kpsF (Cla_0294) Accession : YP_002574907.1 Strain : Campylobacter lari RM2100 Genome accession: NC_012039 Putative virulence/resistance : Virulence Product : arabinose-5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 263136 - 264092 bp Length : 957 bp Strand : + Note : Pfam matches to PF01380.13 SIS, and to PF00571.19 CBS DNA sequence : ATGAGTCAAATAGATGCGATTAAAATAGCCAAAGAAGTTTTCGAAATTGAATCAAAAACGATTTTAGATTTATGCGACAC CTTAAATGAGGAATTTAGTAAAGCGGTTGAGTTGATTTTGTCTATTAAAGGCAGGTGTGTTGTAAGTGGTATGGGTAAGT CAGGTCATGTAGGAGCCAAGATAGCTGCAACTTTAGCTAGTACAGGCACTCCGAGTTTTTTTATGCATCCGGGTGAAGCA TTGCATGGCGATCTTGGAATGATCGCGAGTGAAGATGTTCTTTTGGCTATTTCAAATTCAGGAGAAACTGAAGAGGTTTT AAAACTTATACCAGTGATCAAAAAAAGAAAAATTCCTTTGATTGTCATGGCGGGAGATCAAAACTCTACCTTAGCAAAAC AGGCTGATGTTTTTATCAATATCGCGGTAAAAAAAGAAGCATGTCCGCTTCAACTTGCTCCAACTTCATCTACCACCGCT ACTTTGGCAATGGGCGATGCCATAGCAGTGGCTTTAATGAAAGCAAGGAATTTTAAACCCGATGATTTTGCGTTATTTCA CCCAGGAGGAAGCTTAGGTAGAAAGCTTTTAACCAAAGTGGGTGATTTGATGGTATCAAGCAACCTACCTATAGTCAGCC CTAATAGTGAATTTAATGAATTAGTTGATGTGATGACTAGTGGTAAATTGGGACTTTGTATAGTTGTTGAAAATGAAAAA TTAGTTGGGATTATCACAGATGGAGATTTAAGAAGAGCATTAAGAGCAAATGATAAGCCAAGATTTGACTTTAAAGCTAA AGAAATCATGAGCGAGAGTCCAAAAACCATAGAAGCAAGTGCCATGGCAAGTGAAGCAGAAGAGTTGATGCTAAAACATA AGATTAAAGAAATTGTTGTTACACAAAATGAAAAAATAGCAGGTATTATACAACTTTATGCGATAGGAAATGTGTGA Protein sequence : MSQIDAIKIAKEVFEIESKTILDLCDTLNEEFSKAVELILSIKGRCVVSGMGKSGHVGAKIAATLASTGTPSFFMHPGEA LHGDLGMIASEDVLLAISNSGETEEVLKLIPVIKKRKIPLIVMAGDQNSTLAKQADVFINIAVKKEACPLQLAPTSSTTA TLAMGDAIAVALMKARNFKPDDFALFHPGGSLGRKLLTKVGDLMVSSNLPIVSPNSEFNELVDVMTSGKLGLCIVVENEK LVGIITDGDLRRALRANDKPRFDFKAKEIMSESPKTIEASAMASEAEELMLKHKIKEIVVTQNEKIAGIIQLYAIGNV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 7e-54 | 45 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 2e-53 | 45 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 2e-53 | 45 |
