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Name : katA (Cla_0273) Accession : YP_002574887.1 Strain : Campylobacter lari RM2100 Genome accession: NC_012039 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : 1.11.1.6 Position : 242321 - 243745 bp Length : 1425 bp Strand : + Note : Pfam match to PF00199.10 Catalase DNA sequence : ATGAAAAAATTAACCAATGATTTTGGAAATATCGTAGCTGATAATCAAAATTCATTAACAGCAGGTTCTAAAGGCCCACT TTTAATGCAAGATTATATTTTGCTTGAAAAACTTGCTCATCAAAATAGAGAAAGAATTCCTGAAAGAGCAGTGCATGCCA AAGGAAGTGGTGCTTATGGTGAGCTTAAAATCACAGCAGATATTTCTAAATACACTAAAGCTAAAGTTTTACAACTTGGA GAAAGCACACCTTTATTTATAAGATTTTCAACCGTTGCAGGCGAAGCAGGTGCAGCTGATGCAGAACGCGATGTGAGAGG TTTTGCGATTAAATTTTATACTAAAGAAGGAAATTGGGATTTAGTTGGTAATAATACTCCGACATTTTTTATAAGAGATG CGTATAAATTCCCTGATTTTATCCATACTCAAAAAAGAGATCCAAGAAGTAATTTAAGAAGCAATAACGCTGCTTGGGAT TTTTGGAGCCTTTGTCCTGAAAGCTTGCATCAAGTTACTATTTTAATGAGCGATAGGGGGATTCCTGCAAGTTATCGTCA TATGCATGGTTTTGGAAGTCACACTTATAGTTTGATTAATGATAAAAATGAAAGATTTTGGGTGAAATTTCATTTTAAAA CCAAGCAAGGCATTAAAAATTTAACCAACGAAGAAGCGGCAAATTTAATAGCCAATGATAGAGAAAGTCATCAAAGAGAT TTATATGAGGCTATTGAAAAAGGAGATTTTCCAAAATGGACTTTCCAAATTCAAGTTTTAAAAGAAGATGAAGCAGAAAA ATTAGGTTTTAATCCTTTTGATTTAACTAAAGTTTGGCCTCATAGTATTGTACCTTTAATTGAAGTAGGCGAGTTAGTGC TTAATAAAAATGTACAAAATTATTTTAATGAGGTAGAACAAGCTGCATTTAGTCCAAGCAATATAGTTTCAGGTATTGGT TTTAGTCCTGATAAAATGCTTCAAGCTAGAATTTTTTCATATCCTGATGCACACAGATACCGCATAGGGACAAATTATCA TTTATTGCCAGTTAATCGTGCAAAAAGTGAAGTAAATACTTATAATGTAGCAGGAGCTATGAATTTTGATACTTATAAAA ATGGGCCAGCTTATTATGAACCAAATAGCTATGATGATAGCCCAAAAGAAGATAAAAGCTATCTTGAACCTGATTTAGCA CTTGAAGGTAATGCTCAAAGATATGCTCCGCTAGATGATGATTTTTATACTCAACCAAGAGCCTTATTTGATATAATGAA TGAAAGCCAAAAAGAGCAATTATTTAAAAATATCGCAGCTTCTATGAATGGGGTTGATGAAAAAATTATTGCTAGAGCAT TAAGTCATTTTGAAAAAATTTCAAGTGAATATGCAAATGGTGTTAAAAAAGCTTTAAAAATGTAA Protein sequence : MKKLTNDFGNIVADNQNSLTAGSKGPLLMQDYILLEKLAHQNRERIPERAVHAKGSGAYGELKITADISKYTKAKVLQLG ESTPLFIRFSTVAGEAGAADAERDVRGFAIKFYTKEGNWDLVGNNTPTFFIRDAYKFPDFIHTQKRDPRSNLRSNNAAWD FWSLCPESLHQVTILMSDRGIPASYRHMHGFGSHTYSLINDKNERFWVKFHFKTKQGIKNLTNEEAANLIANDRESHQRD LYEAIEKGDFPKWTFQIQVLKEDEAEKLGFNPFDLTKVWPHSIVPLIEVGELVLNKNVQNYFNEVEQAAFSPSNIVSGIG FSPDKMLQARIFSYPDAHRYRIGTNYHLLPVNRAKSEVNTYNVAGAMNFDTYKNGPAYYEPNSYDDSPKEDKSYLEPDLA LEGNAQRYAPLDDDFYTQPRALFDIMNESQKEQLFKNIAASMNGVDEKIIARALSHFEKISSEYANGVKKALKM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 2e-121 | 60 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 1e-95 | 46 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 6e-95 | 45 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 6e-95 | 45 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 6e-95 | 45 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 6e-95 | 45 |
