Gene Information

Name : peb3 (Cla_1380)
Accession : YP_002575947.1
Strain : Campylobacter lari RM2100
Genome accession: NC_012039
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4588
EC number : -
Position : 1330431 - 1331180 bp
Length : 750 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAAATTTTAAGTTTATTTGGTGTTTGTGCTGTTTTTGCTAGCATGTCTTTTGCTGATATTAATATGTATGGTCC
TGGTGGTCCACATTTTGCATTAAAAGAAGTTGCTAAAGTATATGAAGATAAAACCGGTGTTAAAGTAAATGTAAATTTTG
GTCCTCAAGCTACTTGGTTTGAAAAAGCTAAAAAAGATGCTGATATTTTATTTGGCGCTTCTGATCAATCAGCTTTAGCA
ATAGCTACTGATTTTGATAGTTTTGATCCTAAAAAAATTCAACCATTATATTTTAGAGAAGCTGTTATACTAACTCAAAA
AGGCAATCCTTTAAAAATCAAAGGTTTAAAAGATCTTGCTAATAAAAATGTAAAAGTGGTTGTGCCTGAAGGTGCTGGAA
AAAGTAATACTTCTGGTACTGGTGTTTGGGAAGATATGATAGGTAGAACTAAAAATATCGATACAATAAAAAAATTTAGA
AACAATATAGTAGCTTTTACTCCAAATAGCGGTGGTGCTAGAAAATTATTTTTAGATCAAAAAGCTGATGCTTGGATTAC
TTGGAGTGATTGGGTTAAAGCAAATCCTGATTTTGGTGATGTAGTAAGTATAGAAAAAGATTTAGTAGTATATAGAACTA
TCAATGTGGTTGCTAAAAATGATTCAGATAAACAAACACAAGATTTTATAAAATTCTTACAAACTGACGATGCTTATAAA
ATTTTTAAAAAATATGGCTACAATAAATAA

Protein sequence : 
MKKILSLFGVCAVFASMSFADINMYGPGGPHFALKEVAKVYEDKTGVKVNVNFGPQATWFEKAKKDADILFGASDQSALA
IATDFDSFDPKKIQPLYFREAVILTQKGNPLKIKGLKDLANKNVKVVVPEGAGKSNTSGTGVWEDMIGRTKNIDTIKKFR
NNIVAFTPNSGGARKLFLDQKADAWITWSDWVKANPDFGDVVSIEKDLVVYRTINVVAKNDSDKQTQDFIKFLQTDDAYK
IFKKYGYNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
acfC AAK20768.1 accessory colonization factor AcfC Virulence VPI Protein 5e-54 52
acfC AAK20798.1 accessory colonization factor AcfC Virulence VPI Protein 5e-54 52
acfC AAA82706.1 AcfC Virulence VPI Protein 5e-54 52
VC0841 NP_230489.1 accessory colonization factor AcfC Virulence VPI-1 Protein 9e-54 52
acfC YP_001216322.1 accessory colonization factor AcfC Virulence VPI-1 Protein 9e-54 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
peb3 YP_002575947.1 hypothetical protein VFG0839 Protein 3e-61 52
peb3 YP_002575947.1 hypothetical protein VFG0105 Protein 4e-54 52