Gene Information

Name : pglC (Cla_1255)
Accession : YP_002575826.1
Strain : Campylobacter lari RM2100
Genome accession: NC_012039
Putative virulence/resistance : Virulence
Product : galactosyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 1210876 - 1211478 bp
Length : 603 bp
Strand : +
Note : Pfam match to PF02397.7 Bac_transf

DNA sequence : 
ATGTATAAAAACGGTTTAAAGCGTGTTTTTGACTTTTTTTTGGCTTTGATTTTATTGATTATTTTTTTACCATTTATAGT
GTTTATTGGCATTGTTTTAAAAATTGTTCAAGGAAGTGTGCTTTTTAAACAAGCAAGGCCAGGATTAAATGAAAAAATTT
TTTATATTTATAAATTTAAAACTATGAGCGATGAAAAAGATGAAAATGGGGAATTGCTTCCTGATGAATTACGCTTAAAG
CCTTTTGGTAAATTAATTAGAAGTTTAAGTTTAGATGAATTGCCGCAACTTTTTAATGTATTAAAAGGCGATATGAGTTT
TATAGGCCCAAGGCCTTTGCTTGTAGAGTATTTACCCTTATATAGCCAAGAGCAAAAAAAACGCCACGAAGTAAGACCGG
GCATTACAGGATGGGCACAAATTAATGGACGCAATGCTATTTCTTGGGAGCAAAAATTTAAATATGATGTAGAATATGTG
CAAAATTGCTCATTTTCATTTGATCTTAAAATCTTTTTTATGACGATTATTAAAGTTTTAAAAAGAAGCGGGGTTAATAA
AGAAGGTGTTGCAACAACGGATAAATTCAATGGACACAACTAA

Protein sequence : 
MYKNGLKRVFDFFLALILLIIFLPFIVFIGIVLKIVQGSVLFKQARPGLNEKIFYIYKFKTMSDEKDENGELLPDELRLK
PFGKLIRSLSLDELPQLFNVLKGDMSFIGPRPLLVEYLPLYSQEQKKRHEVRPGITGWAQINGRNAISWEQKFKYDVEYV
QNCSFSFDLKIFFMTIIKVLKRSGVNKEGVATTDKFNGHN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 1e-23 44
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 8e-25 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pglC YP_002575826.1 galactosyltransferase VFG1369 Protein 3e-20 43
pglC YP_002575826.1 galactosyltransferase VFG1309 Protein 1e-23 41