Gene Information

Name : Cla_1165 (Cla_1165)
Accession : YP_002575738.1
Strain : Campylobacter lari RM2100
Genome accession: NC_012039
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1115010 - 1115666 bp
Length : 657 bp
Strand : -
Note : Pfam match to PF00005.18 ABC_tran

DNA sequence : 
ATGAAAAATATTATAAAAATTTCAAATTTAAATCGTAATTTTAATGAAGTTAAAGCTTTGCAAAATATCAACCTAGAAGT
AAAGCAAGGTGAATGGCTAGCCATCATGGGTCCATCGGGTTCAGGTAAATCAACACTTTTAAATATACTTTCTTTGATGG
ATACTCAAAGTAGTGGGGAGTATTTTTTAGATGATAAAGAAGTTGGAAATTTAAGCGAAGAAGAAAAAAGCGTGATTAGA
AGAGAAAAAATAGGTTTGATTTTTCAGCAATTTCATTTAATACCTTATTTAAATGCTCTAGAAAATGTTATGCTAGCTCA
GTTTTATCACTCAAGTATAGAACAAAAAGACGCTATAATGGCACTAGAAAAAGTAGGACTTTCACACAGACTTACGCATT
TACCAAGCCAATTAAGTGGCGGGGAGCAACAAAGGCTATGTATAGCAAGAGCTTTAGTGAATGATCCTGAAATTTTATTA
GCAGATGAGCCAACTGGAAATTTAGATGAGGCAAATGAAAAAAACATTTTAGAGCTTTTTTGTAAATTAAAACAAGATGG
CAAAACCATAGTTTTAATCACTCATAATCCAGATCTAGCTACCTTTGCTGATAGAACTATCATTTTAAGCCATGGAGTGA
TGAAAAGTGAAAATTAA

Protein sequence : 
MKNIIKISNLNRNFNEVKALQNINLEVKQGEWLAIMGPSGSGKSTLLNILSLMDTQSSGEYFLDDKEVGNLSEEEKSVIR
REKIGLIFQQFHLIPYLNALENVMLAQFYHSSIEQKDAIMALEKVGLSHRLTHLPSQLSGGEQQRLCIARALVNDPEILL
ADEPTGNLDEANEKNILELFCKLKQDGKTIVLITHNPDLATFADRTIILSHGVMKSEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cla_1165 YP_002575738.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-52 48
Cla_1165 YP_002575738.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-38 42
Cla_1165 YP_002575738.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 1e-33 42