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Name : tkt (Cla_0116) Accession : YP_002574733.1 Strain : Campylobacter lari RM2100 Genome accession: NC_012039 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 99973 - 101877 bp Length : 1905 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGTTACAAAAACAAGCCAACACTATAAGATTTTTATGCGCTGATATGATACAAAAGGCAAATTCAGGCCATCCAGGTGC ACCTATGGGTTTAGCAGATATTATGAGTGTTTTAAGTACTCATTTAGTACATAATCCAAAAGATCCTACATGGTTAAACC GCGATAGATTAGTTTTTTCAGGCGGTCACGCAAGTGCTTTGCTTTATAGTTTTTTACATTTGAGTGGTTATGATGTAAGT TTAGATGATTTAAAAAATTTCCGTCAATTACACTCTAAAACCCCAGGTCATCCTGAAATTTTCACTCCAGGTGTTGAAAT CGCCACAGGGCCTTTAGGGCAAGGTGTGGCAAATGCAGTTGGTTTTGCTATGGCAGCTAAAAAAGCAAGCTTGCTTTTGG GTGAGGATATTATCAATCATAAAGTGTATTGTTTGTGTGGTGATGGGGATTTGCAAGAGGGAATTTCATATGAGGCTTGC TCTTTAGCTGGGCTTCATAAGCTTGATAATTTAATTATCATTTATGATAGTAATAATATTTCAATCGAAGGTGATGTAGC TATTGCTTTTAATGAAAATGTAAAAGAGCGTTTTAGGGCTCAAAATTTTGAAGTACTTGAGATAGATGGGCATGATTTTG AACAAATTGATTTAGCACTTAAAACAGCTAAGCAAAGTCAAAAACCTTGTTTAATCATCGCTCATACTAAGATAGCAAAA GGAGCCTTAGAGCTTGAGGGAAGTCATCATTCTCATGGGGCACCTTTGGGTGAAGAGCTTATAAAAAAAGCAAAAGAAGC TTTAGGTTTTGATCCGCAAAAAACTTTTGAAATTCCAGAGGATGTTAAAATTCGCTTTGGGGCTGCTGTAGAACTTGGAG ATTTAGCGCAAGCTAAATGGAATCAAAAAGTGCAAAATTTAGATGAGAGTAAAAAGGCGTTATTGAAAGAATTATTAGAG CCTGATTTTAGCAAGATTAATTTTCCAGATTTTAAAGGAAAAGATTTAGCTACTAGAGATAGCAATGGTATGATTTTAAA TGCTATCGCTAAAGCTTTACCGGGATTTTTAGGTGGAAGTGCGGATTTAGGACCATCAAATAAAACTGAACTAAAAGATA TGGGTGATTTTCCAAATGGTAAAAATATCCACTATGGGATAAGAGAGCATGCAATGGCTGCGATATCAAATGCTTTTGCA AGATATGGTTTATTTTTGCCTTATTGTGCAACATTTTTTATATTTAGTGAGTATTTAAAACCTGCTGCAAGAATAGCTGC ATTGATGAAAATCAAACATTTTTTCATCTTTACTCACGATAGCATAGGTGTGGGCGAAGATGGCCCAACTCATCAACCTA TAGAACAACTTAGCACCTTTAGAGCTATGCCAAATTCATTGACATTTAGAGTGGCTGATGGGGTTGAAAATGTAAAAGCG TGGCAAATAGCACTTAAAACTAATATGCCTAGTGTTTTTGTTTTATCGCGTCAAAAATTAAGCGCTTTAAATGAGCCTGT TTTTGGAGATGTTTTAAATGGAGCTTATTTACTAGAAGAAAATGAAAATGCAAATTTTACGCTTTTAGCAAGTGGTAGTG AAGTAGCATTGTGTGTAAAAGCAGCAAAAATTTTAAAAGAAAAAGGCGTGAGTGTTAATGTGGTTTCTATGCCTTGTTAT GAATTATTTATCAAGCAAGAAAAATCTTATAAGGATAGAATTTTACAAGGTAAGGTTATAGGGGTAGAGGCTGCAAATTC TAATGAGCTTTATAGATTTTGTGATGAGCTTTATGGCATAGAAAGTTTTGGGGAAAGTGGTAAAGATAAAGATGTATTTG AGCATTTTGGCTTTAGCGAGGAAAAATTAAGCTCATATATTTTAAGTTTATGTAATGAAAAATAA Protein sequence : MLQKQANTIRFLCADMIQKANSGHPGAPMGLADIMSVLSTHLVHNPKDPTWLNRDRLVFSGGHASALLYSFLHLSGYDVS LDDLKNFRQLHSKTPGHPEIFTPGVEIATGPLGQGVANAVGFAMAAKKASLLLGEDIINHKVYCLCGDGDLQEGISYEAC SLAGLHKLDNLIIIYDSNNISIEGDVAIAFNENVKERFRAQNFEVLEIDGHDFEQIDLALKTAKQSQKPCLIIAHTKIAK GALELEGSHHSHGAPLGEELIKKAKEALGFDPQKTFEIPEDVKIRFGAAVELGDLAQAKWNQKVQNLDESKKALLKELLE PDFSKINFPDFKGKDLATRDSNGMILNAIAKALPGFLGGSADLGPSNKTELKDMGDFPNGKNIHYGIREHAMAAISNAFA RYGLFLPYCATFFIFSEYLKPAARIAALMKIKHFFIFTHDSIGVGEDGPTHQPIEQLSTFRAMPNSLTFRVADGVENVKA WQIALKTNMPSVFVLSRQKLSALNEPVFGDVLNGAYLLEENENANFTLLASGSEVALCVKAAKILKEKGVSVNVVSMPCY ELFIKQEKSYKDRILQGKVIGVEAANSNELYRFCDELYGIESFGESGKDKDVFEHFGFSEEKLSSYILSLCNEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 3e-109 | 45 |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 3e-116 | 44 |
