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Name : Athe_0872 (Athe_0872) Accession : YP_002572755.1 Strain : Caldicellulosiruptor bescii DSM 6725 Genome accession: NC_012034 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 971516 - 972778 bp Length : 1263 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTGATTTAAAATATATAAGGGCAAACCCGGAAAAGGTACAAGAAGGACTTTCTAAGAGAAACAAAGACGTTTCAAT TGCGCCCATTTTAGAGCTTGATGAAAGAAGAAGAAAGCTTTTGGCTGAGGTTGAAAGTCTGAAAGCTCTACAGAATCAAA AATCAAAAGAGGTCCCAAAGCTCAAAAAGGAAGGAAAAGATGTTACAGATCTTATGAATGAGCTAAAAGATCTATCTGAT AAAATTAAAGAATTAGATAGCAAAGTCAAAGAGGTTGAAGATGAGATAGAAAAGATTTTGCTCACAATTCCAAACATTCC TCATGAGTCTGTACCAGTTGGAAAAGATGATACAGAAAATGTTGAAGTAAGGCGCTGGGGTGAGGTAAGAGAACCTGACT TTGAAATAAAGCCTCATTGGGAAATTGGTGTAAATCTTGGAATCTTGGATTTTGAAAGAGCCTCAAAAGTGTCAGGAAGC CGTTTTACATTTTACAGAGGACTTGGTGCAAGGTTAGAAAGAGCTTTAATCAACTTCATGCTTGACCTTCACATTGAAAA GCATGGCTATACTGAGCTATTCCCACCTTTTTTAGTTGCGCGAAAATCTATGATAGGCACAGGACAGCTTCCAAAATTTG AAGAGGATGCATTTAAGACAACAGATGATTACTTTTTGATACCAACAGCAGAAGTTCCTGTTACAAACTACCACAGAGAA GAGATACTCAAAGAAGAAGACTTGCCAATAAAATATGTTGCCTACTCAGCATGTTTTAGGGCAGAAGCTGGTGCTGCTGG CAAAGACACAAGAGGGCTTATTCGTCAGCATCAGTTTAACAAGGTTGAGCTTGTAAAGTTTACAAAGCCAGAAGATTCTT ATGATGAGCTTGAAAAACTCACAGCTGATGCAGAGGATGTTTTAAAGGAATTGGGACTTCCTTACAGGGTTGTTCTTCTT TGTTCGGGTGATTTAGGATTTTCTTCTGCAAAGACATACGACATTGAAGTCTGGATGCCAAGCTATGGAAGATATGTTGA GATTTCTTCTTGTTCAAACTTTGAAAACTATCAGGCACGAAGAGCAAACATCAGATTCAGAAGGAAAGACGGAAAACTTG ACTATGTTCATACACTCAACGGCTCAGGCCTTGCTGTGGGAAGAACCTTAGCAGCAATACTTGAAAACTTCCAGCAGAAA GATGGAACAGTAGTTGTTCCAGAGGTTTTGAGAAAGTATATGGGTACAGATGTGATAAAGTAA Protein sequence : MLDLKYIRANPEKVQEGLSKRNKDVSIAPILELDERRRKLLAEVESLKALQNQKSKEVPKLKKEGKDVTDLMNELKDLSD KIKELDSKVKEVEDEIEKILLTIPNIPHESVPVGKDDTENVEVRRWGEVREPDFEIKPHWEIGVNLGILDFERASKVSGS RFTFYRGLGARLERALINFMLDLHIEKHGYTELFPPFLVARKSMIGTGQLPKFEEDAFKTTDDYFLIPTAEVPVTNYHRE EILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFTKPEDSYDELEKLTADAEDVLKELGLPYRVVLL CSGDLGFSSAKTYDIEVWMPSYGRYVEISSCSNFENYQARRANIRFRRKDGKLDYVHTLNGSGLAVGRTLAAILENFQQK DGTVVVPEVLRKYMGTDVIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 9e-115 | 58 |
