Gene Information

Name : Athe_0315 (Athe_0315)
Accession : YP_002572228.1
Strain : Caldicellulosiruptor bescii DSM 6725
Genome accession: NC_012034
Putative virulence/resistance : Resistance
Product : ArsR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 360421 - 360798 bp
Length : 378 bp
Strand : -
Note : PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: csc:Csac_0193 regulatory protein, ArsR

DNA sequence :
TTGAAAAATCAAGAAGTATCAAAAAAGATTGATTTGTGCAGCTGTAGTGTAATCCACAATGATATTGTGCAAAAAGTAAA
AGAAAGTCTTCCAGATGAAGAAGTTATGTTCGACCTTTCTGAGTTTTTCAAGGTTTTTTCAGACTCAACACGCATAAAAA
TATTAAGCAGTCTCTTGGTTTCTGAGATGTGTGTATGCGACTTAGCAGCAGTCTTAAATACATCCCAGTCGGCAATATCT
CACCAGCTAAGGCTACTAAAAGCTTTCAGGTTAGTAAAGAGCAGAAAAGTCGGCAAAGTTGTGTATTATTCTCTTTCGGA
TGACCATGTAAAAAGTATAATTGAACTCGGTCTTACGCATCTCAGCGAAAGCCAGTAG

Protein sequence :
MKNQEVSKKIDLCSCSVIHNDIVQKVKESLPDEEVMFDLSEFFKVFSDSTRIKILSSLLVSEMCVCDLAAVLNTSQSAIS
HQLRLLKAFRLVKSRKVGKVVYYSLSDDHVKSIIELGLTHLSESQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47608.1 cadmium resistance protein C Not tested Type-III SCCmec Protein 2e-20 45
cadC BAC57488.1 Cadmium efflux system accessory protein homolog, cadmium resistance protein C Not tested Type-IIIinv SCCmec Protein 2e-20 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Athe_0315 YP_002572228.1 ArsR family transcriptional regulator BAC0366 Protein 2e-15 45
Athe_0315 YP_002572228.1 ArsR family transcriptional regulator BAC0456 Protein 2e-21 41