|
Name : Athe_0245 (Athe_0245) Accession : YP_002572168.1 Strain : Caldicellulosiruptor bescii DSM 6725 Genome accession: NC_012034 Putative virulence/resistance : Unknown Product : S-adenosylmethionine/tRNA-ribosyltransferase- isomerase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0809 EC number : - Position : 292214 - 293254 bp Length : 1041 bp Strand : + Note : TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: csc:Csac_0153 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase DNA sequence : ATGGGAAAATGGAAACTAAGCGACTTTCACTATGACTTGCCAGATGAGCTGATTGCACAAAAACCTGTAGAGCCGCGGGA CAGCTCAAGGCTCATGGTTATTTTGCCAGACGGCAGGATTGAGCACAGAATTTTCCGCGATATAGTTGAATATTTAAATG AGGGTGACTGTCTTGTTCTAAATAACTCTAAGGTCATACCAGCAAGGTTAATTGGGCAAAGGGAAGAGACTGGCAGTTTT ATAGAGTTTTTACTTATAAAAAGGCTTGATATAAACACATGGGAGGTCATGACACGGCCTGGAAAAAAGGCGAGAAAAGG GAGAAGATTTGTATTTGGAAATGGAGAGTTAAAAGCTGAGGTTTTACATGTAAACAGAGAAGAAGGTACAAGGGTTGTAA GGTTCTACTACGATGGGGTGTTCGAAGAGGTTTTAGAGAGACTGGGCAAGATTCCTCTTCCACCATATATAAAAGAGGAG CTTGATGATCTTTCAAGATATCAGACAGTGTACAGCAAAGTGCCTGGTTCTGCTGCAGCACCAACTGCAGGTCTTCACTT TACGGAAGAGCTACTTAGCAGAATATCAAAAAAAGGTGTTGAAATTTTGTATGTGACACTTCACGTTGGGCTTGGAACTT TTAAGCCTGTTAAGGTTGAAAATGTAGAGGAGCACAAGATGCATGAGGAGTATTATGAAATCTCTGAAGATGTTACAGAA AGAATAAATAGAGCAAAAGAACTTGGTAAAAGAGTGATTGCGGTTGGGACGACATCTTGCAGGGTTTTAGAATCGTGCTG TGATGAAAATGGAAAAGTAAAAGCTAAAAAAGGTTGGACAGATATATTTATCTACCCTGGCTATGAATTTAAAGTTCTTG ACGGGCTTGTTACAAACTTCCATCTTCCGGATACTACCTTGATGATGCTTGTCTGTGCGTTTGGCGGATATGAGAGAATC ATGAATGCTTACAAGATTGCTGTCGATATGCGTTATAGGTTTTTCAGCTTTGGAGATGCAATGCTGATATTGAGAAGATA A Protein sequence : MGKWKLSDFHYDLPDELIAQKPVEPRDSSRLMVILPDGRIEHRIFRDIVEYLNEGDCLVLNNSKVIPARLIGQREETGSF IEFLLIKRLDINTWEVMTRPGKKARKGRRFVFGNGELKAEVLHVNREEGTRVVRFYYDGVFEEVLERLGKIPLPPYIKEE LDDLSRYQTVYSKVPGSAAAPTAGLHFTEELLSRISKKGVEILYVTLHVGLGTFKPVKVENVEEHKMHEEYYEISEDVTE RINRAKELGKRVIAVGTTSCRVLESCCDENGKVKAKKGWTDIFIYPGYEFKVLDGLVTNFHLPDTTLMMLVCAFGGYERI MNAYKIAVDMRYRFFSFGDAMLILRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| queA | AAT96122.1 | QueA | Not tested | T-PAI | Protein | 1e-69 | 49 |
| queA | AAT96182.1 | QueA | Not tested | T-PAI | Protein | 2e-65 | 48 |
| queA | AAT96106.1 | QueA | Not tested | T-PAI | Protein | 9e-66 | 48 |
| queA | AAT96042.1 | QueA | Not tested | T-PAI | Protein | 9e-66 | 48 |
| queA | AAT96070.1 | QueA | Not tested | T-PAI | Protein | 7e-66 | 48 |
| queA | AAF71490.1 | QueA | Not tested | Hrp PAI | Protein | 3e-67 | 48 |
| queA | AAF71483.1 | QueA | Not tested | Hrp PAI | Protein | 2e-70 | 48 |
