Gene Information

Name : Athe_2297 (Athe_2297)
Accession : YP_002574140.1
Strain : Caldicellulosiruptor bescii DSM 6725
Genome accession: NC_012034
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2431005 - 2431682 bp
Length : 678 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_2447 ABC transporter related

DNA sequence :
ATGATCGAACTTTATGATATCTACAAAATCTACAAGATGGGCGAAAATGAGGTGTATGCTTTAAACGGTATTAACCTGAA
AATCAATGTTCACGAGTTTGTTGCAATAGTGGGTCCATCCGGCTCAGGAAAATCAACTCTTATGAACATCATAGGCTGTC
TTGACACACCAACATCTGGCACATACATACTGGATAGTCATGAAGTCAGCAGGCTAAATGACAACCAGCTTGCAGAGATT
CGAAACAGCAAGATAGGCTTTGTGTTTCAAAACTTTAACTTAATACCACAGCTCACAGCTCTTGAAAACGTTGAGCTTCC
TTTAATCTACAAAGGTGTTCCAGCCTCTGTGCGTCACAAGCTTGCCAAAGAAGCTCTTGCCAGGGTTGGCTTGGAACATA
GAATGCACCACAGGCCAAGAGAGCTTTCAGGCGGTCAGCAGCAGAGAGTTGCAATTGCAAGGGCGCTTGTCACAAGCCCG
CCAATAATCCTGGCTGACGAGCCCACTGGGAACTTGGACTCAAAATCAGGTGCTGAGATTATGCAGATTTTCAAGGAGCT
TCACGCTCAAGGAAACACCATTGTCCTAATCACGCACGATAACAACATTGCCATGCAGGCAAGAAGGATTGTAAGAATTC
AGGACGGTCAAATAATAGAGGACAAGGAGGTGAGCTGA

Protein sequence :
MIELYDIYKIYKMGENEVYALNGINLKINVHEFVAIVGPSGSGKSTLMNIIGCLDTPTSGTYILDSHEVSRLNDNQLAEI
RNSKIGFVFQNFNLIPQLTALENVELPLIYKGVPASVRHKLAKEALARVGLEHRMHHRPRELSGGQQQRVAIARALVTSP
PIILADEPTGNLDSKSGAEIMQIFKELHAQGNTIVLITHDNNIAMQARRIVRIQDGQIIEDKEVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 5e-37 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Athe_2297 YP_002574140.1 ABC transporter NC_012469.1.7686878. Protein 8e-61 59
Athe_2297 YP_002574140.1 ABC transporter CP001581.1.gene598.p Protein 3e-42 49
Athe_2297 YP_002574140.1 ABC transporter CP001581.1.gene798.p Protein 4e-40 47
Athe_2297 YP_002574140.1 ABC transporter NC_008702.1.4606598. Protein 1e-48 47