Gene Information

Name : Athe_1932 (Athe_1932)
Accession : YP_002573792.1
Strain : Caldicellulosiruptor bescii DSM 6725
Genome accession: NC_012034
Putative virulence/resistance : Resistance
Product : protein tyrosine phosphatase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : -
Position : 2041037 - 2041450 bp
Length : 414 bp
Strand : +
Note : PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: csc:Csac_0638 protein tyrosine phosphatase

DNA sequence : 
ATGAAACCAAGTGTTGCTTTTGTATGTGTTGGCAATTCATGTCGAAGCCAGATGGCAGAAGGTTTTGCTAAACACTATGG
AAAAGATTTGATTGAAGTATACAGTGCAGGAACAGATATCGCAAAAGAGGTAAACCCGCTTGCCATTGAGGTCATGAAAG
AGGTTGGAATTGATATCTCTTCACATTTCCCAAAGACAATATTCGATATCCCCAAAGAGGTAGACTTTTTAATCACAATG
GGATGTGGTGTTGAGTGTCCGTTTATCCCATGCAAGGTCAAAGAAGATTGGGGACTACCTGACCCAGCAGGAAAGCCTAT
TGAAGAATTTAGAAAAGTAAGAGATGAAATAGAAAAAAAGGTATTGGAGCTGCTTGAACGAATTAAAAAAGAATATTATG
GGGAGGGAAAATAA

Protein sequence : 
MKPSVAFVCVGNSCRSQMAEGFAKHYGKDLIEVYSAGTDIAKEVNPLAIEVMKEVGIDISSHFPKTIFDIPKEVDFLITM
GCGVECPFIPCKVKEDWGLPDPAGKPIEEFRKVRDEIEKKVLELLERIKKEYYGEGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 1e-20 53
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 3e-19 50
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 4e-19 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Athe_1932 YP_002573792.1 protein tyrosine phosphatase BAC0032 Protein 6e-19 51
Athe_1932 YP_002573792.1 protein tyrosine phosphatase BAC0580 Protein 2e-19 50
Athe_1932 YP_002573792.1 protein tyrosine phosphatase BAC0581 Protein 1e-16 48
Athe_1932 YP_002573792.1 protein tyrosine phosphatase BAC0586 Protein 7e-17 45