Gene Information

Name : Athe_1786 (Athe_1786)
Accession : YP_002573652.1
Strain : Caldicellulosiruptor bescii DSM 6725
Genome accession: NC_012034
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1860146 - 1861021 bp
Length : 876 bp
Strand : -
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: csc:Csac_2329 tyrosine recombinase XerD

DNA sequence :
ATGAGTATCATAGAAGCGTTTGGTAATTACCTCCAGAGACAGAATAGATTTTCACAGAATACTATAAGTTCGTATTTACG
GGACGCTAAAAAATACATAGAGTTTTTAGATGACATAAAAATAAAACTTGAAAATACTTCTCAGACAACATTGATAGCAT
ACATTATCAGTATGCAAAAAGGTGGTAAATCAAACAGTACTATTGCACGTGCAATTGTTTCACTAAAAGTCTTTTATGAA
TTTCTAAAAATTCAGGATATTGTTGATATTGGAAAGATTGAGATTGAACCTCCAAAACTTGAAAAAAGTCCACCTCAGAT
ACTTACAAGAGATGAGGTGGAAAGGCTTCTTTCATGTCCGAAAGAGGATGATATTAAAGGAATCAGAGATAAAGCAATGC
TTGAGCTTTTGTATGCAACAGGTATCAGGGTAAGCGAGCTTATAAATCTCAATCTTGACGACATCAATCTTGAACACGGA
TATATTATTTGCAAAAACAAGAAAAGAGACAGAGTTATTCCCATTGGTTCATATGCCATTTCGGCAGTGGAGAAGTATTT
GCGTCATTCACGACCTTACCTTGCAAAAAGTAAAGATGAAGAAGCTCTTTTTTTGAACTTTAGCGGTGAAAGAATGACAA
GACAGGGATTTTGGAAGATAGTAAAGTTTTATGCACAAAATGCAAAGATAGATAAAGAAATAACACCGCATGTGCTCAGA
CACTCTTTTGCCACTCATCTAATTGAAAATGGTGCGGATGTGAGAGCTGTTCAGCAAATGCTTGGCCATGCTGATATTTC
CACAACACAGAGATACCTTCAAGTTGCAAATGTTAAGCTAAAAGAGGTGTATCAAAAAACCCATCCACGTGCATAA

Protein sequence :
MSIIEAFGNYLQRQNRFSQNTISSYLRDAKKYIEFLDDIKIKLENTSQTTLIAYIISMQKGGKSNSTIARAIVSLKVFYE
FLKIQDIVDIGKIEIEPPKLEKSPPQILTRDEVERLLSCPKEDDIKGIRDKAMLELLYATGIRVSELINLNLDDINLEHG
YIICKNKKRDRVIPIGSYAISAVEKYLRHSRPYLAKSKDEEALFLNFSGERMTRQGFWKIVKFYAQNAKIDKEITPHVLR
HSFATHLIENGADVRAVQQMLGHADISTTQRYLQVANVKLKEVYQKTHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-46 41
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-46 41