|
Name : Athe_0165 (Athe_0165) Accession : YP_002572090.1 Strain : Caldicellulosiruptor bescii DSM 6725 Genome accession: NC_012034 Putative virulence/resistance : Unknown Product : alpha amylase catalytic domain-containing protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 203747 - 205420 bp Length : 1674 bp Strand : - Note : PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: csc:Csac_2428 alpha amylase, catalytic region DNA sequence : ATGGACTTGCACAAAAAGTGGTGGAAGGAAGCTGTTGTATATCAAATCTATCCTCGAAGTTTTTATGACTCAAACGGTGA TGGAATTGGAGATTTGCCAGGAATAATAGAAAAACTTGATTATTTACAAGAACTTGGAGTGGATGTTATTTGGCTAAATC CTATTTACAAATCCCCAAATGCAGACAATGGTTATGACATCAGCGATTACTATGATATCATGGACGAGTTTGGTACAATG GAAGACTTTGATAGGCTCTTGAATGAAGCTCACAAAAGAGGAATTAAAATTGTAATGGACCTTGTTGTGAACCACACATC TGATGAACACAAATGGTTTTTGGAGTCCAGAAAATCAAAAGACAATCCTTACAGAGATTTTTATTTTTGGCGGCCTGGTA AAAATGGAGGGCCTCCTAATAACTGGACATCCTTTTTCAGCGGCCCTGCTTGGGAATACGATGAGCTGACAGGAGAATAT TACCTTCACCTTTTTGCTGTAAAGCAACCAGACCTCAACTGGAACAATCCTCAGGTTCGTCAAGAAATTTACAAAATGAT GAAGTGGTGGCTTGACAAAGGCATAGATGGTTTTAGAATGGATGTAATAAACCTCATTTCAAAAGTTGAAGGACTGCCAG ATGACCCAGATGAAAATCAAGGAGGTTTGATTGGTTTTAAATACTATGCCAACGGTCCAAGGGTGCATGAATATCTTCAG GAAATGAACAGAGAAGTACTTTCTAAATACGATATCATGACAGTGGGAGAGACTCCATTTGTAACTCCTGAGATTGCAAA GCTGTATGTAGAGTATGACAGAAATGAGCTTAATATGCTCTTTCATTTTGAGCACATGGATATGGACTGCAGCGGCAGCA AGTGGAATATAAAACCTTGGAAACTCACTGATTTGAAAAAGATAATGTACAAGTGGTATTTGGCTTTAAAAGACAAGGGC TGGAATTCGCTTTATCTTAACAACCATGACCAGCCAAGGATGGTCTCACGCTTTGGAAACGACAAAGAGTACAGGGTTGA GTCTGCAAAGCTTTTAGCAACCCTGCTTCACACATGGCAGGGAACTCCTTATATCTACCAAGGTGAAGAGATTGGTATGA CAAACTGCAAGTTTGAAAGTATTGATGAGTTCAGGGACATTGAAACACTCAACTGGTACAAAGAGATGAAAAAGCTTGGA AAATCAGATGAAGAGCTTTTAGAAATCTTAAACAAAAGAAGCAGAGACCATGCACGAACACCTATGCAGTGGGATGATTC TGAAAATGCAGGATTTACAAAAGGTACCCCATGGATAAAGGTAAATCCAAATTATAAGGAAATAAATGTTAAAAAAGCTT TAGAAGATAAAAATTCAGTGTTTTATTACTATAAGAAATTGATTGAACTTAGAAAAAAGCATCCTGTCATTGTATATGGG GATGTTCAAATGCTTTATGAGGACGATGAAAAGATCTTTGCATATACAAGAAGCTATGAAGATGAAAGGCTTCTTGTTGT AATGAACTTTTCTGAAGAAGAAAGCGAGTTTTTAGCACCAAATGAAATATTTACCCAAAAACCTGAACTTCTGATAAGTA ACTATGAAATTGACGACAATATCCAAGAAAAAATTGTTTTAAAACCTTATGAATCGAGGGTATACAAAATATAA Protein sequence : MDLHKKWWKEAVVYQIYPRSFYDSNGDGIGDLPGIIEKLDYLQELGVDVIWLNPIYKSPNADNGYDISDYYDIMDEFGTM EDFDRLLNEAHKRGIKIVMDLVVNHTSDEHKWFLESRKSKDNPYRDFYFWRPGKNGGPPNNWTSFFSGPAWEYDELTGEY YLHLFAVKQPDLNWNNPQVRQEIYKMMKWWLDKGIDGFRMDVINLISKVEGLPDDPDENQGGLIGFKYYANGPRVHEYLQ EMNREVLSKYDIMTVGETPFVTPEIAKLYVEYDRNELNMLFHFEHMDMDCSGSKWNIKPWKLTDLKKIMYKWYLALKDKG WNSLYLNNHDQPRMVSRFGNDKEYRVESAKLLATLLHTWQGTPYIYQGEEIGMTNCKFESIDEFRDIETLNWYKEMKKLG KSDEELLEILNKRSRDHARTPMQWDDSENAGFTKGTPWIKVNPNYKEINVKKALEDKNSVFYYYKKLIELRKKHPVIVYG DVQMLYEDDEKIFAYTRSYEDERLLVVMNFSEEESEFLAPNEIFTQKPELLISNYEIDDNIQEKIVLKPYESRVYKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 2e-149 | 58 |
