Gene Information

Name : Athe_1224 (Athe_1224)
Accession : YP_002573097.1
Strain : Caldicellulosiruptor bescii DSM 6725
Genome accession: NC_012034
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 1313984 - 1316023 bp
Length : 2040 bp
Strand : +
Note : KEGG: csc:Csac_1789 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; type III restriction protein res subunit;

DNA sequence :
ATGAATGTTCTTGAAAAAGACATAAGATTCTTAAAAGGTGTTGGAGAAAACAGAGAAAAGCTATTTAAAAAGCTGGGTAT
AAAAAAAGCCGAAGATTTGCTCTGGCACATACCCCGAAAATATCTTGATTATAGCAGGCTAAAGAAAATAAGAGAGCTTT
GTGATGGTGAGATAGAGTCATTTGTTGCAAAGGTTGCAGGCAAACCTGTGGAGATAGAAACAAGGTCAGTAAAGATAATA
AAAATTCCTGTTGAGGATAGTACCGGGGTTGTTACAACTGTATGGTTTAACCAGGACTATATAAAAAATGTTTTGAAAGA
AGGAGAGGTTTTTTGCTTTTCTGGGAAGATTGAGAGAAAAGGCTTTTATATTGAAGTGAAAAATCCTGAATTTGAGAAAT
ATGACCAACATCTTATTCATACAGGTAGGATTGTTCCTGTATATAATTCTACTGAAGGTCTTTCACAAAAGGTGATTAGA
AATATTGTAAACAATCTTTTGCAGCAAGTTGATGGAATGCTTATAGATATAATTCCGCCTTATATAAGGCAAAAATATAA
TTTGAGTGAAATCAATTTTGCAATAAAAAATATTCATTTTCCAGAAAACAAATTGAGTTTAGAACTTGCAAGGAAAAGGC
TTGTGTTTGAAGAGTTTTATCTTCTTCAGCTTTCCCTTTTGCTTCTAAAAGAAAACATAGAAAAAAACGAAGGAATAAAA
ATTGAAAATGTGCAAAGTAGCTTAAAAGAGTTTGAAAAGCTTCTTCCGTTTGAGTTGACCGAGGCGCAAAAAAGAGTGCT
GGCAGAGATTGCACAAGATTTAGAAAGTACAAAACAGATGAACAGGCTTATCCAAGGCGATGTGGGTTGCGGAAAGACGG
TTGTAGCTTTGGCAAGCGCGTATGCAACAATTAAAGCGGGATATCAGGTTGCACTAATGGCACCAACAGAGGTTTTAGCT
TTGCAGCATTATAACGAATGTAAAAAATACTTTGATAATAAATTCAATGTAAGACTTCTAATTGGATCAACTCCAAAAAA
AGAAAAGGAAATAATCTTAAAAGAGCTTGAACATGGACTTTGCAAAATGGTCATTGGAACCCATGCACTTATCCAAGATG
ATGTAAAATTTAAAAACCTTGGCTTGGCAATTACTGATGAACAGCACAGATTTGGAGTTATCCAAAGGGTAGAGCTTACA
AAAAAAGGAAGTTCACCGAACATTCTTGTTATGACAGCAACTCCAATACCCAGAACTTTGAGTTTGGTTTTGTATGGAGA
CCTTGATATTTCTATTATTGACCAGCTACCTCCCGGCAGAAAAAAAATTTTGACATACGCTGTTGATGAGAGTTTTCGCC
AGCGTGTGTACAATTTCATAAAGAAACAGTTAAATGAAGGAAGGCAGGTTTACTGGATATGTCCTCTGATTGAAGAGTCA
GAAACTTTGAATGCAAAATCGGCGGTTGAATTTGCAAAATCTTTGAAAGAAGGATTTTTTAAAGACTACAATGTAGCTTG
CTTACACGGAAAACTTTCTGTAAAAGAGAGAGACAAAATCTTAAATGATTTTAAAGATGGACACATTCATATATTAGTTT
CAACTACAGTTGTCGAGGTTGGAATAAACGTTCCAAATGCCACAGTTATGGTGATTGAAAATGCTGAAAGATTTGGACTT
GCCCAGCTGCATCAGCTTAGGGGGCGAGTTGGCAGAGGCGAGTACCAGTCGTACTGTATCTTGTTTAATCAAAGCGATTC
AGAGATTGCCAAAAAAAGGATGATAGCTATAACAAGAAGTCAGAACGGGTTTGAAATTGCTGAAATGGACCTAAAACTTC
GAGGACCTGGTGATTTATTTGGAACAAAACAACATGGTATCATGAACTTTAAAGTAGCCGATATCATAAATGATATGGAT
ATTTTAAAGCAAGCAAGAATTGCTGCAGAAGAAACCATTAGACTTAATCTTGTTGATAATAAACTTTTAGAGAAAATCAA
TAAACAATTTTACAATAATATAGAAAATATTGGCCTTTAA

Protein sequence :
MNVLEKDIRFLKGVGENREKLFKKLGIKKAEDLLWHIPRKYLDYSRLKKIRELCDGEIESFVAKVAGKPVEIETRSVKII
KIPVEDSTGVVTTVWFNQDYIKNVLKEGEVFCFSGKIERKGFYIEVKNPEFEKYDQHLIHTGRIVPVYNSTEGLSQKVIR
NIVNNLLQQVDGMLIDIIPPYIRQKYNLSEINFAIKNIHFPENKLSLELARKRLVFEEFYLLQLSLLLLKENIEKNEGIK
IENVQSSLKEFEKLLPFELTEAQKRVLAEIAQDLESTKQMNRLIQGDVGCGKTVVALASAYATIKAGYQVALMAPTEVLA
LQHYNECKKYFDNKFNVRLLIGSTPKKEKEIILKELEHGLCKMVIGTHALIQDDVKFKNLGLAITDEQHRFGVIQRVELT
KKGSSPNILVMTATPIPRTLSLVLYGDLDISIIDQLPPGRKKILTYAVDESFRQRVYNFIKKQLNEGRQVYWICPLIEES
ETLNAKSAVEFAKSLKEGFFKDYNVACLHGKLSVKERDKILNDFKDGHIHILVSTTVVEVGINVPNATVMVIENAERFGL
AQLHQLRGRVGRGEYQSYCILFNQSDSEIAKKRMIAITRSQNGFEIAEMDLKLRGPGDLFGTKQHGIMNFKVADIINDMD
ILKQARIAAEETIRLNLVDNKLLEKINKQFYNNIENIGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 1e-78 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Athe_1224 YP_002573097.1 ATP-dependent DNA helicase RecG BAC0356 Protein 2e-90 41