Gene Information

Name : Athe_0111 (Athe_0111)
Accession : YP_002572042.1
Strain : Caldicellulosiruptor bescii DSM 6725
Genome accession: NC_012034
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 134738 - 135451 bp
Length : 714 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cpf:CPF_1199 ABC transporter, ATP-binding protein

DNA sequence : 
ATGGGAAAGAGAGGTGAAGATGACAATTTGTCTGCAAATGAAGCTCTAATAAAAGTTGAAAATGTGAAAAAATCCTTTAA
AATAGGAACAAACAGTGTGGAAGTCTTAAGAGGAATCAGTTTAGAAATCTACCAAGGTGAGTTTGTTGCGATTGTTGGTG
AGTCAGGTTCAGGCAAAACAACACTACTAAACATCATTGGTGGGCTTTTAAGACCTTCTGAGGGAAGTGTTGTGATTGCC
AGCAAAGACATTACAGCCATGAGCGAAAATCAGCTTGCCATTTTTAGAAGAGAAAATATAGGATTTGTTTTTCAGTCATA
TAACCTTATACCTCATTTTACGGCGGTTGAGAATGTGGAAATTCCGCTTATGTTCAAAGGAATTAGTAAAAAGAAGCGTC
GTGAGATGGCTGCTTTTATGCTTGAAAAGGTAGGTTTAAAAGATAGACTTTTTCACAAACCTGCTGAACTTTCTGGCGGG
CAGCAGCAAAGAGTTGCAATTGCAAGGGCGCTTGTAACATCCCCTAAAATAATTCTTGCTGATGAGCCAACAGGAAATCT
TGATAGCAAAAATGGTCAGGAGATTCTTGACCTTATGCTTCAGCTTAACAAAAATGAAAATATTACACTTGTTGTTGTAA
CCCACTCTCAAGTTGTGAGCAAAACTGCTTCAAGAGTGATAAAAATTGCTGATGGACTAATAATTGGAACTTAA

Protein sequence : 
MGKRGEDDNLSANEALIKVENVKKSFKIGTNSVEVLRGISLEIYQGEFVAIVGESGSGKTTLLNIIGGLLRPSEGSVVIA
SKDITAMSENQLAIFRRENIGFVFQSYNLIPHFTAVENVEIPLMFKGISKKKRREMAAFMLEKVGLKDRLFHKPAELSGG
QQQRVAIARALVTSPKIILADEPTGNLDSKNGQEILDLMLQLNKNENITLVVVTHSQVVSKTASRVIKIADGLIIGT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-39 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-40 47
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-40 47
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-40 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Athe_0111 YP_002572042.1 ABC transporter NC_012469.1.7686878. Protein 2e-49 49
Athe_0111 YP_002572042.1 ABC transporter CP001581.1.gene598.p Protein 4e-43 47
Athe_0111 YP_002572042.1 ABC transporter CP001581.1.gene798.p Protein 8e-46 47
Athe_0111 YP_002572042.1 ABC transporter NC_008702.1.4606598. Protein 6e-42 46