Gene Information

Name : Chy400_0888 (Chy400_0888)
Accession : YP_002568641.1
Strain : Chloroflexus sp. Y-400-fl
Genome accession: NC_012032
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1118427 - 1119110 bp
Length : 684 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_0822 ABC transporter related

DNA sequence :
ATGGAGACGAAGACGCCACTAATTACGCTCACCGCTGTAACCAAAGCCTACGCCACGGCTGCCGGCGACTATCTGGCCCT
GCGTGGTATCGATCTGCGCATCGACCCCGGCGAATTCGTCGCGATTGTCGGTAAGTCGGGCAGTGGCAAATCAACGCTGC
TCAATATCATCACCGGCATTGATCGGGCGAGCAGTGGCGAGGTGCGAGTCGCCGGCGCCGATCTGATGCAGATGCCGGAA
TCGCGGATGGCGAGCTGGCGTGGGCGCACGGTCGGGATTGTGTTTCAGTTCTTTCAGTTGTTACCAACTCTGACGACGCT
GGAAAATGTGATGTTACCGATGGACTTTTGCCATATCGGTACACTGCGCGAACGGCGCGAGCGAGCCATGGCATTGTTAG
AGAGGGTTGGGCTGGCCGATCAGGCCGATAAATTGCCCATGGCACTCTCTGGTGGTCAGCAGCAGCGGGTCGCGATTGCC
CGTGCTCTGGCCAATAACCCACCGCTCCTGGTCGCCGATGAGCCAACCGGTAATCTCGACTCGCAGACTGCTGAGGCGGT
GTTTCAGCTCTTCATCGAACTGGCCGGCCAGGGCACAACGATTGTGATGGTTACGCACGACAGCGATCTTGCCCGGCGGG
CTGGTCGGGTGGTACTGGTATCAGATGGCCGGATTGTGCATTGA

Protein sequence :
METKTPLITLTAVTKAYATAAGDYLALRGIDLRIDPGEFVAIVGKSGSGKSTLLNIITGIDRASSGEVRVAGADLMQMPE
SRMASWRGRTVGIVFQFFQLLPTLTTLENVMLPMDFCHIGTLRERRERAMALLERVGLADQADKLPMALSGGQQQRVAIA
RALANNPPLLVADEPTGNLDSQTAEAVFQLFIELAGQGTTIVMVTHDSDLARRAGRVVLVSDGRIVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-27 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chy400_0888 YP_002568641.1 ABC transporter CP001581.1.gene798.p Protein 5e-30 43
Chy400_0888 YP_002568641.1 ABC transporter NC_012469.1.7686878. Protein 5e-33 43
Chy400_0888 YP_002568641.1 ABC transporter NC_008702.1.4606598. Protein 1e-25 42