Gene Information

Name : Chy400_0523 (Chy400_0523)
Accession : YP_002568285.1
Strain : Chloroflexus sp. Y-400-fl
Genome accession: NC_012032
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 624230 - 624949 bp
Length : 720 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_0487 ABC transporter related

DNA sequence :
ATGTTTCAACAACCAATGCAAATGATTGACAAAACTGTTATCTGTTGTGAGCATGTTACAAAGTCATATCTCGAAGGCGA
GCGTCAGCGGATCGTCTTGCGTGACATTACGTTCCAGGTTCAGGCTGGCGAGCTGATTGTTTTGCTGGGCAAGAGTGGGA
GTGGCAAGAGCACCCTGCTCAATCTCGTGAGTGGCATTGATACACCGGATACCGGCGCAATCTGGGTGGCCGGGCAGCGC
CTTGATCAGTTGCGTGAGCGGGAGCGCACCCTCTTTCGTCGTCGCTCAATTGGCTTCGTATTCCAGTTTTATAATCTTGC
GCCTACGCTCACCGCGCTGGAGAATGTACTGCTGCCCCTCGAATTGAATGGTCAGCGCGGAGCAACGGCACGCGCAGCAG
CACTGGCAATGCTCGAAGCGGTTGGATTGGCCGACCGCGCTAATACCTATCCTGATCGCCTCAGTGGTGGCGAGCAGCAG
CGGGTGGCAATTGCTCGCGCACTGGTTCATAACCCTGAACTCGTGCTGGCCGACGAGCCAACCGGCAATCTTGATAGTGA
TACCGGTGCTCAGGTGCTCGATCTCCTCGACCAGCTTACCCGCCAACAGGGTAAGACCCTGATCATGGTGACGCATAGCC
GCGAGATGGTTGGTGTAGCTGACCGCGTCTTTCAGTTACGCAATGGTCAGATTCAGGAAGTGGCGTTGTCGGCAGTTTGA

Protein sequence :
MFQQPMQMIDKTVICCEHVTKSYLEGERQRIVLRDITFQVQAGELIVLLGKSGSGKSTLLNLVSGIDTPDTGAIWVAGQR
LDQLRERERTLFRRRSIGFVFQFYNLAPTLTALENVLLPLELNGQRGATARAAALAMLEAVGLADRANTYPDRLSGGEQQ
RVAIARALVHNPELVLADEPTGNLDSDTGAQVLDLLDQLTRQQGKTLIMVTHSREMVGVADRVFQLRNGQIQEVALSAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-30 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chy400_0523 YP_002568285.1 ABC transporter NC_012469.1.7685735. Protein 1e-40 46
Chy400_0523 YP_002568285.1 ABC transporter NC_012469.1.7686878. Protein 3e-34 45
Chy400_0523 YP_002568285.1 ABC transporter NC_008702.1.4606598. Protein 2e-27 45
Chy400_0523 YP_002568285.1 ABC transporter CP001581.1.gene598.p Protein 6e-32 42
Chy400_0523 YP_002568285.1 ABC transporter CP001581.1.gene798.p Protein 2e-32 41