Gene Information

Name : Chy400_4141 (Chy400_4141)
Accession : YP_002571823.1
Strain : Chloroflexus sp. Y-400-fl
Genome accession: NC_012032
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 5127214 - 5128068 bp
Length : 855 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_3834 ABC transporter related

DNA sequence : 
ATGTTGCATACTGAGAAACTTACCCTGGCCTATGATCAAACCATCATCATCCACGACATGGATGTTGCCATCCCGCGTGG
TCAGATCACCGCGCTGGTGGGACCAAACGGCTGTGGCAAGAGCACCTTGTTGCGCGGGTTAGCCCGTTTACTGGCGCCGA
GGGGAGGCGCAGCCTATCTGGATGGCAAAGCCATTCATCGGATGCCAACCCGTGAACTGGCAAAACAACTCGGTATTCTG
CCGCAAAGCCCGGTGGCGCCAGAAGGACTAACCGTCCGCGAACTGGTTGCACAGGGTCGTTACCCTCATCAATCCTGGTT
TCAGCAGTGGTCTGCCGACGACGAAAGCGCCGTTGTCAAAGCGCTTGAATTGACCGGCATGACCGACCTGGCTGAACGAC
CGGTCGATACCCTATCGGGTGGTCAGCGGCAACGCGCCTGGATCGCGATGACGCTGGCGCAAGAAACTGAGGTCATTCTC
CTTGATGAGCCAACTACTTTTCTAGACCTGGCGCATCAGATCGAAGTGCTTCAGTTGCTGGAGCGGCTGAACCGCAGCGA
ACAGCGCACCATCGTGATGGTAGTGCATGACCTGAACCATGCAACTCGGCATGCTCATCACATTATCGCGCTGAAAGCCG
GCAAAGTCGCCGCTATTGGTGCGCCCACCGAGGTAGTTACTCCAGCATTGCTGCGTGAGGTGTTCGGCGTCGAGGGTGCA
GTCGTGCCCGATCCGCGCAGCGGCGTACCGTTGTGTATCGCCTACGGGATCGCCGTACCAGCCTCTGCCAATGATCGTTG
CGCCTTACGTCCGATTGACGCAGAGGAGTTCTGTTTGTATGACCCGGAAAGGTAA

Protein sequence : 
MLHTEKLTLAYDQTIIIHDMDVAIPRGQITALVGPNGCGKSTLLRGLARLLAPRGGAAYLDGKAIHRMPTRELAKQLGIL
PQSPVAPEGLTVRELVAQGRYPHQSWFQQWSADDESAVVKALELTGMTDLAERPVDTLSGGQRQRAWIAMTLAQETEVIL
LDEPTTFLDLAHQIEVLQLLERLNRSEQRTIVMVVHDLNHATRHAHHIIALKAGKVAAIGAPTEVVTPALLREVFGVEGA
VVPDPRSGVPLCIAYGIAVPASANDRCALRPIDAEEFCLYDPER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-61 53
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-52 50
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-52 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-52 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-52 50
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-52 48
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-52 48
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-52 48
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-52 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 5e-51 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-49 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-49 44
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-49 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chy400_4141 YP_002571823.1 ABC transporter BAC0164 Protein 3e-51 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chy400_4141 YP_002571823.1 ABC transporter VFG0925 Protein 7e-59 52
Chy400_4141 YP_002571823.1 ABC transporter VFG1042 Protein 3e-51 47