Gene Information

Name : Chy400_4140 (Chy400_4140)
Accession : YP_002571822.1
Strain : Chloroflexus sp. Y-400-fl
Genome accession: NC_012032
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 5126095 - 5127165 bp
Length : 1071 bp
Strand : +
Note : PFAM: transport system permease protein; KEGG: cau:Caur_3833 transport system permease protein

DNA sequence : 
ATGAGTGTTGAGGTTCCATCTTCCCGTGGTCAGCAGTCACCGTGGCTAACCCTGCGCACCCGTGGTCTTTCTTTTCGCAT
TGACCGACGTGTGCCGCCGGTACTGACTCTGGCACTGCTGGCAACGATCACAGCAATGGTGATCAACATTGGGGTCGGTG
CATACCCTATCCCACCGCTCGATGTGATACGGACTGTGCTCGGCCTACCGACCGGCAATGAAGACTATTCCTTCATCGTG
AACGTTTTACGTCTACCGCGTATGCTCGTCGCTGCGCTAGTCGGCATGGCACTTGGGGTGTCTGGAGCGATTATCCAGGG
CTTGACCCGCAATCCACTGGCCGATCCCGGCATCCTTGGCATCAGCGCCGGCGCCAGCCTCAGCGCCGTGACCCTTATCG
TGGTCGTACGCAACGTACCATCCGGCGTGATTCCTATTGCTGCTTTCGGCGGTGCTGTTACGGTCGCCACATTGATCTAT
CTTCTGGCCTGGCGAGGCGGCGATTCTCCCATTCGATTGGTCCTGGTCGGCATTGGATTGGGGGCAATCTGTAGCGCAGC
CACAACCTTGATGATCACCTTTGGCGATATTTGGGATGTACAACGGGCGCTGGTCTGGATCACGGGCAGTGTCTACGGAC
GCTCGTGGGAAGAGTTCTGGCCCCTCTTGCCGTGGATCGTTATCTTTGTACCACTGGCCTTCTTTCTGGCTCGCGATCTC
AACGCCCTCAATCTGGGTGAAGAAGTCGCGCAGGGATTAGGCATCCCAGTGGCCTGGCGGCGCGGCCTGTTACTGCTCAC
AGCGGTCGCCCTGGCAGCAGCAACAGTTGCTGCTGCGGGTACGATTGGCTTTGTGGGCTTAATGGCGCCACATATCGGGC
GGAGACTGGTTGGTCCTGATCATAGCGGCTTGTTGCCAACCGCCGGCATCATCGGCGCACTCCTGGTCGTCCTGGCCGAT
CTGGTGGGGCGCACGCTGTTTTCACCCATCGAACTACCTGCCGGATTGGTTACCGCTGCCATTGGCGCACCTTTCTTTAT
CGGATTGCTGTGGCGACAGCAAAAGCGATGA

Protein sequence : 
MSVEVPSSRGQQSPWLTLRTRGLSFRIDRRVPPVLTLALLATITAMVINIGVGAYPIPPLDVIRTVLGLPTGNEDYSFIV
NVLRLPRMLVAALVGMALGVSGAIIQGLTRNPLADPGILGISAGASLSAVTLIVVVRNVPSGVIPIAAFGGAVTVATLIY
LLAWRGGDSPIRLVLVGIGLGAICSAATTLMITFGDIWDVQRALVWITGSVYGRSWEEFWPLLPWIVIFVPLAFFLARDL
NALNLGEEVAQGLGIPVAWRRGLLLLTAVALAAATVAAAGTIGFVGLMAPHIGRRLVGPDHSGLLPTAGIIGALLVVLAD
LVGRTLFSPIELPAGLVTAAIGAPFFIGLLWRQQKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 6e-34 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chy400_4140 YP_002571822.1 transport system permease BAC0163 Protein 2e-34 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chy400_4140 YP_002571822.1 transport system permease VFG1043 Protein 3e-34 43