Gene Information

Name : Chy400_3520 (Chy400_3520)
Accession : YP_002571217.1
Strain : Chloroflexus sp. Y-400-fl
Genome accession: NC_012032
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 4384408 - 4385148 bp
Length : 741 bp
Strand : -
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cau:Caur_3262 short-chain dehydrogenase/reductase SDR

DNA sequence : 
ATGCGTCTCAGTGGCAAAGTAGCCCTGATTACCGGTGCTGGTCAGGGGATTGGACGGGCAACCGCCCTGTTGTTTGGTCA
GCACGGCGCCAAAGTTGCCGTTGCCGATATTAATGAGGAAGCAGCCCAGGCAACAGCTCAGGCGATTGTGGATGCTGGCG
GTGAAGCCAAAGCGTTTTTCATGAACGTAGGCCAGGCCGCCTCGGTGGAAGCTGCGGTAAAAGCAGTTGTTGAATGGGCG
GGTAGAATTGACGTATTGGTGAACAATGCCGGCATTACACGCGATGCCCGGATGATCAAGATGACTGAAGAGCAATTTGA
TGCCGTGATCAATGTCAATCTGAAAGGCGTCTGGCTCTGCACCAAATATGTGGCTCCAATCATGATCGAGCAGGGCGGCG
GCTCTATTATTAATGCAGCTTCTATCGTGGCGTTTGAAGGTAATTTCGGTCAGACCAATTATGTCGCTACCAAAGCTGGC
GTGATTGGAATGACCAAGACCTGGGCCCGCGAATTTGGGCCAAGTGGCATCCGCGTCAATGCCGTTGCCCCTGGCTTCAC
CCAAACTGAGATGATTGCTCACGTGCCGGAAAAGGTGCTTGAGGAGTTCAAAGGCCGTACACCGCTACGCCGGTTAGGTA
CTGCCGAGGATATGGCCTACGCCTATCTTTTCCTTGCATCTGATGAGGCGAGCTTTATCACCGGTGAGGTGTTACCGGTT
GATGGAGGTCTGACTCTTTAA

Protein sequence : 
MRLSGKVALITGAGQGIGRATALLFGQHGAKVAVADINEEAAQATAQAIVDAGGEAKAFFMNVGQAASVEAAVKAVVEWA
GRIDVLVNNAGITRDARMIKMTEEQFDAVINVNLKGVWLCTKYVAPIMIEQGGGSIINAASIVAFEGNFGQTNYVATKAG
VIGMTKTWAREFGPSGIRVNAVAPGFTQTEMIAHVPEKVLEEFKGRTPLRRLGTAEDMAYAYLFLASDEASFITGEVLPV
DGGLTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 1e-33 45
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 1e-33 45
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 3e-33 45
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 2e-33 45
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 5e-34 44