Gene Information

Name : Chy400_3100 (Chy400_3100)
Accession : YP_002570805.1
Strain : Chloroflexus sp. Y-400-fl
Genome accession: NC_012032
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3825001 - 3825699 bp
Length : 699 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cau:Caur_2863 response regulator receiver

DNA sequence :
ATGGCGACGGTTCTCATCGTCGAAGACGAAACCACGTTGGCCGAGACACTACGCTACAACCTCGAACGCGAAGGCTATTC
CGTCATTGTCGCCGGTGATGGTGTTCAGGGTCTCGACCGTGCTCGCCGTGATCAACCCGATCTCGTTGTCCTCGACATTA
TGCTCCCCCGTCTTGACGGCTTCTCGGTCTGTCGGATTCTGCGTCAAGAGAGCGATGTACCGATCATCATGCTCACGGCT
CGTCAGGACGAGGTTGATCGGATTGCCGGTCTGGAACTGGGGGCTGATGACTACATGGGCAAGCCGTTTAGCCTCGGCGA
GTTCCTTGCTCGTGTGCGGGCGATCCTGCGGCGCAGCGAACGACAGCCTCATTCGATTGTACGTGAAGTGCTAGAGGCCG
GGGCGATCCGGGTGGACACCAGCAGCCGTCGGGCCTGGCGGAATGGGCAGGAACTGAATCTCCCGCAGAAAGAATTCGAT
CTGCTCACCTGTCTGATGCGTAATCGTGGGATTGCCCTGACGCGCGATCTGCTGCTCGAACGGGTATGGGGACAGGACTT
CATCGGTGATAGTCGCACTGTCGATGTCCATATCCGCTGGCTGCGCGAGAAGATAGAGCCAGACCCTGGCAAACCGGTTT
ATATCCAGACGGTGCGAGGGGTTGGGTATCGGTTTGAACCGCCATCTGATGATGCGTAA

Protein sequence :
MATVLIVEDETTLAETLRYNLEREGYSVIVAGDGVQGLDRARRDQPDLVVLDIMLPRLDGFSVCRILRQESDVPIIMLTA
RQDEVDRIAGLELGADDYMGKPFSLGEFLARVRAILRRSERQPHSIVREVLEAGAIRVDTSSRRAWRNGQELNLPQKEFD
LLTCLMRNRGIALTRDLLLERVWGQDFIGDSRTVDVHIRWLREKIEPDPGKPVYIQTVRGVGYRFEPPSDDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-31 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator NC_002952.2859905.p0 Protein 3e-52 49
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator NC_002745.1124361.p0 Protein 2e-52 48
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator NC_009782.5559369.p0 Protein 2e-52 48
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator NC_002951.3237708.p0 Protein 2e-52 48
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator NC_007622.3794472.p0 Protein 2e-52 48
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator NC_002758.1121668.p0 Protein 2e-52 48
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator NC_009641.5332272.p0 Protein 2e-52 48
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator NC_013450.8614421.p0 Protein 2e-52 48
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator NC_007793.3914279.p0 Protein 2e-52 48
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator NC_003923.1003749.p0 Protein 3e-52 48
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 2e-44 48
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator AE016830.1.gene1681. Protein 1e-51 47
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 2e-49 46
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator HE999704.1.gene1528. Protein 2e-39 45
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 2e-48 45
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator NC_007793.3914065.p0 Protein 3e-41 44
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator NC_002758.1121390.p0 Protein 3e-41 44
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator NC_010079.5776364.p0 Protein 3e-41 44
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator NC_002952.2859858.p0 Protein 3e-41 44
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator AE015929.1.gene1106. Protein 5e-39 44
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator NC_007622.3794948.p0 Protein 3e-41 44
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator NC_003923.1003417.p0 Protein 3e-41 44
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator NC_013450.8614146.p0 Protein 3e-41 44
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator NC_002951.3238224.p0 Protein 3e-41 44
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator BAC0197 Protein 2e-35 44
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator NC_012469.1.7686381. Protein 2e-45 44
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator BAC0125 Protein 2e-37 43
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator BAC0111 Protein 7e-39 42
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator CP001918.1.gene3444. Protein 2e-34 42
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator BAC0083 Protein 3e-37 41
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator BAC0347 Protein 3e-36 41
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator CP000034.1.gene3671. Protein 5e-38 41
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator CP001485.1.gene721.p Protein 3e-36 41
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator AF155139.2.orf0.gene Protein 4e-39 41
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator CP000034.1.gene2186. Protein 5e-35 41
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator BAC0039 Protein 5e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator VFG1389 Protein 3e-37 47
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator VFG1390 Protein 6e-40 45
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator VFG1386 Protein 4e-40 43
Chy400_3100 YP_002570805.1 winged helix family two component transcriptional regulator VFG0596 Protein 5e-32 42