Gene Information

Name : Chy400_2667 (Chy400_2667)
Accession : YP_002570383.1
Strain : Chloroflexus sp. Y-400-fl
Genome accession: NC_012032
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 3297795 - 3300296 bp
Length : 2502 bp
Strand : -
Note : PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: cau:Caur_2473 ATPase AAA-2 domain protein

DNA sequence :
ATGTCTGACCTCTACAGCAAATTTACCAAGCGCGCCAAGCAAGTGCTGCAACTGGCAGCCGAGGAAGCACGTGCGTTCAA
TCACCCATACATTGGTACCGAGCATATTTTGCTGGGCTTGATCCGCGAAAGTGAAGGGATTGCTGCGCGCGTCCTCGATG
AGCTGGGTGTGAAATTGCCCCAGGCCCGTAGTGCGGTCGAGTTTATCGTTGGCCCTGGCGAAAGCACAATGGTTACCGAC
CAGGAGCTGACGGCACGGGCGCAGAAGGTGATTAAGTATGCTATCGAAGAGGCGAATCGCCTCAACCATCACTACATCGG
CACCGAGCATCTGCTGCTGGGGTTGGTGCGCAACGGTGAGGGGGTGGCAACCGGTGTCCTCGATATTCTCGGTGTCTCCC
TCGAACAGGTGCGCAATCAGGTAATGCGTGTCTTGCGCCACGGCACAGCCGGCGCAACTGCTGAAGGACGGACTGCTCCC
GGTACGACGCCGACGCAGCGGCAGTCGAAGACCCCGTATCTCGACGCACTGGGTACCGATTTGACCGAGATGGCCGAGCA
GGGTCGTCTCGACCCCATCATTGGCCGCCAACACGAGATCGAGCGCGTCATTCAGATTCTCTCACGCCGCACGAAGAACA
ATCCGGCCCTGATTGGTGAACCGGGTGTCGGTAAGACAGCCATCGTCGAGGGCCTCGCCCAGCGCATCGTTCAGGGTGAT
GTGCCAGATAGCATTAAGGGCAAGCGAGTTGTTACGCTCGACATGGGTGCGCTGGTTGCCGGTACCAAGTACCGTGGTCA
ATTTGAAGAGCGGTTGAAGCGCGTGATCGACGAGATCAAGGAGTCGCGCTGTATTCTCTTTATCGATGAGTTCCACACCA
TCATCGGTGCCGGTGGCGCAGAAGGGACGCTCGATGCGGCCAACATCCTCAAGCCCGCTCTGTCGCGTGGAGAGTTGCAA
ACCATCGGGGCCACAACCCTCGATGAGTACCGCAAGTATATCGAGCGTGACGCCGCTCTGGAACGCCGCTTCCAGCCGGT
GATGGTTGATGAGCCGTCGATTGAAGATACCATCCAGATTTTGCGCGGGATCAAGTCGCGCTACGAGGATTTCCATCAGT
TGCAGATCAGTGACGAGGCGATCCGGGCAGCGGCAGTACTCTCGGCACGCTACGTCCCTGACCGCCAGCTCCCCGATAAG
GCGATTGACCTGATTGACGAAGCGGCGTCACGGGTACGCATGTACCGCTCGGCGACACCGCCGCGCCTGCGCGATGCCCT
GCGTGGCCTGGAGGCGCTGCGCAAAGAGCGCGAAGCCGCCCTCGAAGATCAGCAGTTTGAACTTGCCAACGATCTGCGCG
AGCGCGAAGAGCGTATGCTCAGCCGCATCCAGGAGATCGAGGCCGAGCTGGGTACCCGCAGCGACGAACGCTACGAGCGC
CCATACGTCACCGAAGAAGACATTGCCGAGGTCGTTGGCATGTGGACGGGCGTGCCCGTGACCCGGCTGACCGGTAATGA
AACCCAGCGCCTGATGCAGATGGAGGAGTTCCTCCATAGCCGGATCGTCGGTCAGCACGAAGCCATCGTCACCATCTCGA
AAGCCGTGCGTCGCGCCCGTGCCGGCCTGAAAGACCCGAAGCGCCCAATCGGAAGCTTCATCTTCCTCGGCCCAACCGGT
GTCGGCAAGACCGAGCTGGCCAAGGCACTGGCCGAGTTTATGTTCGGCACCGAAGAGGCGCTGATCAAGATCGACATGTC
AGAGTTCCAGGAGCGCCACACGACCTCGCGCCTGGTTGGCTCGCCGCCCGGCTACATCGGCTACGGCGAAGGTGGTCAAC
TGACCGATGCCGTGCGCCGGAAGCCGTACAGTGTCGTGCTGTTTGATGAAATCGAAAAGGCGCACCCCGATGCCTTCAAC
CTGCTGCTCCAGGTGCTGGAGGATGGTCATCTGACCGATGGTAAAGGGCGACGGGTCGACTTCCGCAATACCATCATCAT
CATGACCAGCAACGTCGGCACCGAACACATTCGCCGCGCATCGCGGATTGGGTTTGGTAGCAACGCCGCCGAGATCGATC
AGAACGATATGCGGCGCAAGGTGGATGAAGCGCTCAGAATGCTCTTCCGGCCAGAGTTCCTCAACCGGATCGACGCGACC
ATCATCTTCCACCCGCTCACCACCGAGGAGATTCAATCGATCACCCGGCTCATGCTCAAGCGTGTCCAGACCCAGCTCGA
CGAGCACCAGATCAAGCTGGAGGTGCAACCCGACGCCCTCGAATTCCTGGCCCGCCGCGGCTACGATCCGGCGTTCGGTG
CCCGCCCCTTGCGCCGGGTGATCACCAACCTGATCGAAGACCCGCTGGCGGAGGGGCTGCTCTCTGGTCAGTTCCGCGAC
GGCGATACAGTTATCGTCGATACCTTTGAGGATCAGTTGCGCCTCCGTTCACAACGCGAGATCGACCAGGAACACGTCGA
GGAAAGCCCGGCACTTGCCTGA

Protein sequence :
MSDLYSKFTKRAKQVLQLAAEEARAFNHPYIGTEHILLGLIRESEGIAARVLDELGVKLPQARSAVEFIVGPGESTMVTD
QELTARAQKVIKYAIEEANRLNHHYIGTEHLLLGLVRNGEGVATGVLDILGVSLEQVRNQVMRVLRHGTAGATAEGRTAP
GTTPTQRQSKTPYLDALGTDLTEMAEQGRLDPIIGRQHEIERVIQILSRRTKNNPALIGEPGVGKTAIVEGLAQRIVQGD
VPDSIKGKRVVTLDMGALVAGTKYRGQFEERLKRVIDEIKESRCILFIDEFHTIIGAGGAEGTLDAANILKPALSRGELQ
TIGATTLDEYRKYIERDAALERRFQPVMVDEPSIEDTIQILRGIKSRYEDFHQLQISDEAIRAAAVLSARYVPDRQLPDK
AIDLIDEAASRVRMYRSATPPRLRDALRGLEALRKEREAALEDQQFELANDLREREERMLSRIQEIEAELGTRSDERYER
PYVTEEDIAEVVGMWTGVPVTRLTGNETQRLMQMEEFLHSRIVGQHEAIVTISKAVRRARAGLKDPKRPIGSFIFLGPTG
VGKTELAKALAEFMFGTEEALIKIDMSEFQERHTTSRLVGSPPGYIGYGEGGQLTDAVRRKPYSVVLFDEIEKAHPDAFN
LLLQVLEDGHLTDGKGRRVDFRNTIIIMTSNVGTEHIRRASRIGFGSNAAEIDQNDMRRKVDEALRMLFRPEFLNRIDAT
IIFHPLTTEEIQSITRLMLKRVQTQLDEHQIKLEVQPDALEFLARRGYDPAFGARPLRRVITNLIEDPLAEGLLSGQFRD
GDTVIVDTFEDQLRLRSQREIDQEHVEESPALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chy400_2667 YP_002570383.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 0.0 55
Chy400_2667 YP_002570383.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 6e-150 50