Gene Information

Name : Chy400_2149 (Chy400_2149)
Accession : YP_002569875.1
Strain : Chloroflexus sp. Y-400-fl
Genome accession: NC_012032
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2725682 - 2726515 bp
Length : 834 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_1994 ABC transporter related

DNA sequence :
ATGACAGCTTCATCAGTCATCGCACCGACAGTTGCCGATCCGGTAACGACGGTTCCCGCGTTAGATATTCGTCATCTCAC
CGTCCATTACCGGCAGAACGAGGCGCTACACGATGTCTCGGTGACTATCAATGTGGGTGAGCAAGTGGCAATTGTCGGGC
CAAACGGTGCCGGTAAAAGTACCCTACTGAAAGCTATCGCCGGCCTTCAACCGATTACCAGCGGCGAGATTCGCTATTTC
GGCCAAGAGCGGGTCGCGCCGAATGAGATTGCCTACGTGCCTCAGCGGTTGCAGATCGACTGGCGCTTTCCGGTTTCGGT
CAGTGATGTGGTTTTAATGGGCCGGGTCGGTCGCATTGGTCTCTTCCGTCGTCCTTCTCAGCATGACCGGCAGCTTGCCC
AACGAGCGTTAGAACGGGTTGGGCTGGCAGCGTTTGCCAATCGCCAGATCGGTCAGTTGTCAGGCGGTCAGCAACAGCGG
GTGTTTCTGGCGCGAGCGTTGGCGCAAGAAGCACGCCTGTTATTAATGGATGAACCACTGGTTGGGCTGGATATTCCCTC
GCAAGACGAGATCTTTCGCACCCTGGCTACGCTACGCCAGGAAGGCGTCACCGTCTTGACGGCGCTGCACGATCTGCAGC
AGGCAGCGCGCTATTTTGATCGGGTGATGCTCCTCAATCGTAGCCTGATTGCGTGCGCACCGGCTCGCGCAGCCTTCACT
GCTGCCCATCTGGTCGCTACCTATGGCGGGCATCTTCATCTCTTGCAGAGTGGTGATGGGCTGCTTACTGTCGCTGATAG
TTGTTGTAATCCTGATCCGGATGGCGGTCTATGA

Protein sequence :
MTASSVIAPTVADPVTTVPALDIRHLTVHYRQNEALHDVSVTINVGEQVAIVGPNGAGKSTLLKAIAGLQPITSGEIRYF
GQERVAPNEIAYVPQRLQIDWRFPVSVSDVVLMGRVGRIGLFRRPSQHDRQLAQRALERVGLAAFANRQIGQLSGGQQQR
VFLARALAQEARLLLMDEPLVGLDIPSQDEIFRTLATLRQEGVTVLTALHDLQQAARYFDRVMLLNRSLIACAPARAAFT
AAHLVATYGGHLHLLQSGDGLLTVADSCCNPDPDGGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 8e-34 43
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 6e-34 43
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 6e-33 42
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 8e-33 42
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 8e-33 42
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 8e-33 42
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-33 42
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 6e-21 42
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 5e-21 42
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 5e-21 42
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 5e-21 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chy400_2149 YP_002569875.1 ABC transporter BAC0400 Protein 6e-42 51
Chy400_2149 YP_002569875.1 ABC transporter BAC0440 Protein 3e-36 43
Chy400_2149 YP_002569875.1 ABC transporter BAC0350 Protein 4e-33 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chy400_2149 YP_002569875.1 ABC transporter VFG0526 Protein 3e-33 42