Gene Information

Name : Chy400_0209 (Chy400_0209)
Accession : YP_002567973.1
Strain : Chloroflexus sp. Y-400-fl
Genome accession: NC_012032
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 249192 - 249968 bp
Length : 777 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_0196 ABC transporter related

DNA sequence : 
ATGGAAGTTGCAGTTGACATCAAAGATTTGACCGTTGCCTACGGTGATAAACCGGTTTTATGGGACGTTGATCTTCAGGT
TCCCCGTGGCGTGTTGATGGCGATTGTCGGCCCCAATGGTGCCGGCAAGACGACGCTCCTCAAAGCCATGCTAGGGCTGG
TCAGACCAGCAGCGGGAAGTGTGCGTGTATTTGGCCGGCCATACCACCAGCAACGGCATCTGATCGCTTACGTGCCGCAA
CGCAGCAGCGTTGATTGGGACTTTCCGACGACAGTGCTTGATGTGGTGTTGATGGGACGCTACGGACATCTCGGCTGGTT
CCGTCGTCCGGGCCGGGCTGAGCGGGACGCGGCGCTGGCCGCCCTTGCCCAGGTCCAGATGGCCGATTTCGCCCATCGCC
AGATCGGTCAGCTTTCGGGTGGTCAACAGCAGCGTGTCTTCCTGGCCCGTGCGCTGGCACAGGCGGCTGAAATCTACGTG
ATGGATGAACCGTTTCAAGGCGTTGATGCCGTGACCGAGCGCGCCATCATCAACGTTTTACGCGACCTGCGAGCTGCCGG
CAAGACGGTTGTCGTCGTGCACCACGATTTGCAGACCGTGACCGAGTATTTCGATCACGTTGCGCTCATTAACGTGCGGC
GAATTGCTGCCGGCCCGGTTGCCGAGGTCTTTACCGAGGCGAATCTGCGGGCAACGTATGGTGGTCGTCTCGCCCTGTTG
CATACACCCACCGACACTGCACCCGCTGCCCGGCCAACCCCGGCACCAGGCGATTGA

Protein sequence : 
MEVAVDIKDLTVAYGDKPVLWDVDLQVPRGVLMAIVGPNGAGKTTLLKAMLGLVRPAAGSVRVFGRPYHQQRHLIAYVPQ
RSSVDWDFPTTVLDVVLMGRYGHLGWFRRPGRAERDAALAALAQVQMADFAHRQIGQLSGGQQQRVFLARALAQAAEIYV
MDEPFQGVDAVTERAIINVLRDLRAAGKTVVVVHHDLQTVTEYFDHVALINVRRIAAGPVAEVFTEANLRATYGGRLALL
HTPTDTAPAARPTPAPGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-52 48
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-52 48
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-52 47
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-52 47
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-52 47
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 3e-47 46
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 4e-47 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chy400_0209 YP_002567973.1 ABC transporter BAC0400 Protein 2e-73 64
Chy400_0209 YP_002567973.1 ABC transporter BAC0350 Protein 6e-53 47
Chy400_0209 YP_002567973.1 ABC transporter BAC0440 Protein 2e-48 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chy400_0209 YP_002567973.1 ABC transporter VFG0526 Protein 5e-53 47