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Name : Chy400_1964 (Chy400_1964) Accession : YP_002569695.1 Strain : Chloroflexus sp. Y-400-fl Genome accession: NC_012032 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 2493120 - 2496254 bp Length : 3135 bp Strand : + Note : KEGG: cau:Caur_1816 type I site-specific deoxyribonuclease, HsdR family; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases DNA sequence : ATGGCGCATTTGACCGAATCAAACATCGAGACCGTCGCCCTTGACTGGTTGAAATCGCTGGGTTGGCAGGTCGCGCACGG TCCTGGTATCGCTCCTGGCATGTCGGCAGCCGAACGTCAAAACTACGGCGAGGTCGTGCTCGAGCAGCGCCTGCGCGACG CTCTTGCACGTCTCAACCCCGACCTGCCAACCGAGGCGCTGGACGACGCCTTCCGCAAACTGACTCAACCCGAAGGGGCT GATCTTCTCCAGCGCAACCGCGTCGTTCACCTCATGCTGGCGAACGGCGTGACGGTGGAATACCGTCATCCCGACGGCGG TATTCGCGGCACACAGGTGCGTGTGATAGATTTCGACGACCCCGCCAACAACAACTGGCTGGCGGTGAACCAGTTTAGCA TTGAGGAGAACAAGCACAACCGCCGCGCCGACGTGGTGCTGTTCGTCAACGGTCTGCCCCTCGCGATCATCGAACTCAAA AACGCAGCCGACGAGCACGCAACCATCTGGAGTGCATTCCAGCAATTGCAAACCTACCAGGTAGAGATCCCATCCTTGTT TGTCTTCAACGAGACGTTAGTTATCTCTGATGGTCTCGAAGCGCGCATTGGCACACTGGGTGCTGGTCGCGAGTGGTTTA AACCCTGGCGCACCATCTCCGGCATGCAGGTAGAGGATGTTGGTGTACCACAGCTAGAGGTTGTGCTCAAGGGTGTGTTC GAGAAAAATCGCTTTCTTACTCTCATACGTGACTTTATCGTGTTTGAGGACGATGGTAGTGGACGGTTAGTGAAGAAGAT GGCTGGTTACCACCAGTTTCATGCTGTACTGGTAGCGGTGAAGGAAACCCTACGCGCCAGCGCAGTTGTTTCATCCAACC GTATGGCGGAGTCGGGTGGCGTCTATGAAGCAGGACGCGAACCTGGCGGTAAGCCTGGTGATCGACGTATCGGTGTTGTC TGGCACACGCAAGGTTCGGGAAAGAGCCTGACGATGGTGTTCTACGCGGGGTGCATCATTCGCAAACCAGCTATGGAGAA CCCTACCATCGTTGTGCTTACCGACCGTAATGATCTTGACGACCAGCTCTTCAACACCTTCTCACGCTGTCAGGATTTAC TGCGCCAGCCGCCCGTGCAAGCTGAAAGTCGTGTACACCTACGCCAGCTCCTAAGCGTGCAGTCAGGCGGTATCGTTTTT ACCACTATTCAGAAATTTCTACCCGAAGAGAAGGGCGACCGTCATCCAGTATTGTCCAACCGTCGGAACATCGTCGTGAT CACTGACGAGGCACACCGCAGCCAGTACGACTTCATTGACGGTTTTGCCCGCCATATGCGCGATGCACTACCTCAGGCAT CCTTTATTGGTTTCACTGGCACGCCGATTGAGAAGGCGGATGCCGATACACGAGCAGTTTTTGGAGATTACATCTCAATC TATGATATTCAGCGTGCGGTGGAAGATGGTGCGACCGTATCGATTTATTATGAGGCACGGCTAGCAAAACTCGATCTTCC TGACGAACTCAAGCCAAAGATTGACGATGAGTTTGAGGAGATTACAGAAGGTGAGGAAGTTGAGCGTAAAGAAAAGCTCA AAACCAAATGGGCGCAGCTTGAATCCATTGTCGGCACTGAACAACGGCTGAGACTGATTGCCAACGATATTATCGAGCAT TTTGAGCGGAGACTGGAGGCAATCGAAGGTAAAGGCATGGTTGTCTGCATGAGCCGGCGCATCTGTGTTGAGCTGTATAA CATCATTTGCACTCTTCGTCCCAACTGGCATCACGAAGACGACGACAAAGGTGTAATAAAGGTAGTGATGACCGGTTCTG CCTCCGACCCGGTAGACTGGCAGCCGCATATTCGCAATAAACAACGCCGCGAACTGCTGGCGAAGCGCTTTCGTGATCCG AACGATCCGCTTAAATTGGTCATCGTGCGTGATATGTGGCTCACCGGATTTGATTGTCCGAGTCTACACACGATGTACCT GGACAAGCCGATGCGCGGCCACGGGTTAATGCAGGCAATTGCCAGGGTCAATCGCGTCTTTCGCGATAAGCCGGGTGGTC TGGTGGTGGACTATCTGGGCCTTGCCCACGAATTGAAGGCTGCACTGGCGGTTTACACTGAAAGCGGTGGTACTGGTAAA ACCACTATTGACCAGGAAGAGACTGTTGCGTTGATGCAAGAGAAGTACGAAATCTGCTGTGGAATCCTGCACGGCTTCGA TTGGTCGGATTGGGCAAGTGGTGATGCACATGCACGCATTGGACTTTTACCTGCAGCTCAAGAACACGTGCTGGCACGCG TGAAAGGAAAGGAACGATTTGTTCAGGCGGTGCGTGATTTGACAAAAGCCTTTGCCCTTGCAGTGCCGCATGAAAAAGCG CTTGAGATTCGTGATGATGTGGCATTTTTTCAGGCGCTCTCTGCGGCGCTGACCAAACGCGCACCCGGCGATGTAAGAAC TGAAGAGCAGCTAGATCATGCCATTCGGAGGATTATTGCGCAGGTAATTGCGCCTGAAGGCGTGGAGGATATTTTTGCTG CGGCAGGGCTGAAAAAGCCGGATATCTCCATCCTCTCCGATGAATTCCTGGCTGAAGTGCGTGGTATGCCGCACAAGAAT CTGGCAGTTGAAGTTCTTCAGAAACTGCTTAACGGTGAAATTAAGAGGCGTAGCCACAAAAATATCGTTCAGGCACGCTC ATTCGCTGAACTGTTACAGCAAGCCCTTCACCGTTACCAGAATCGTGCAATCGAAGCAGCACAGGTGATCGAAGAATTGA TAACTTTGGCGAAGGAAATGCGTGAAGCCGACCGGCGGGGTGAAGTATTGGGCCTTTCGGAGGAGGAGCTGGCGTTTTAC GATGCGCTTGAAACAAATGATAGTGCTGTGGCTGTGTTGGGTGATCAGACTCTACGCACCATTGCCCGTGAACTCGTCGA GACCGTGCGTAACAGTATCAGTATTGATTGGGCACAGCGGGAAGATGTACGGGCGAATCTACGCAGATTGGTTAAGCGCA TTCTTCGCAAGCACGGCTATCCACCAGACAAGCAGGAGAAAGCTACGCAGACTGTATTGGAACAGGCGGAAGTGCTTTCA GCAGAATGGGCCTAA Protein sequence : MAHLTESNIETVALDWLKSLGWQVAHGPGIAPGMSAAERQNYGEVVLEQRLRDALARLNPDLPTEALDDAFRKLTQPEGA DLLQRNRVVHLMLANGVTVEYRHPDGGIRGTQVRVIDFDDPANNNWLAVNQFSIEENKHNRRADVVLFVNGLPLAIIELK NAADEHATIWSAFQQLQTYQVEIPSLFVFNETLVISDGLEARIGTLGAGREWFKPWRTISGMQVEDVGVPQLEVVLKGVF EKNRFLTLIRDFIVFEDDGSGRLVKKMAGYHQFHAVLVAVKETLRASAVVSSNRMAESGGVYEAGREPGGKPGDRRIGVV WHTQGSGKSLTMVFYAGCIIRKPAMENPTIVVLTDRNDLDDQLFNTFSRCQDLLRQPPVQAESRVHLRQLLSVQSGGIVF TTIQKFLPEEKGDRHPVLSNRRNIVVITDEAHRSQYDFIDGFARHMRDALPQASFIGFTGTPIEKADADTRAVFGDYISI YDIQRAVEDGATVSIYYEARLAKLDLPDELKPKIDDEFEEITEGEEVERKEKLKTKWAQLESIVGTEQRLRLIANDIIEH FERRLEAIEGKGMVVCMSRRICVELYNIICTLRPNWHHEDDDKGVIKVVMTGSASDPVDWQPHIRNKQRRELLAKRFRDP NDPLKLVIVRDMWLTGFDCPSLHTMYLDKPMRGHGLMQAIARVNRVFRDKPGGLVVDYLGLAHELKAALAVYTESGGTGK TTIDQEETVALMQEKYEICCGILHGFDWSDWASGDAHARIGLLPAAQEHVLARVKGKERFVQAVRDLTKAFALAVPHEKA LEIRDDVAFFQALSAALTKRAPGDVRTEEQLDHAIRRIIAQVIAPEGVEDIFAAAGLKKPDISILSDEFLAEVRGMPHKN LAVEVLQKLLNGEIKRRSHKNIVQARSFAELLQQALHRYQNRAIEAAQVIEELITLAKEMREADRRGEVLGLSEEELAFY DALETNDSAVAVLGDQTLRTIARELVETVRNSISIDWAQREDVRANLRRLVKRILRKHGYPPDKQEKATQTVLEQAEVLS AEWA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 50 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 45 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 45 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 45 |
