Gene Information

Name : Chy400_1132 (Chy400_1132)
Accession : YP_002568879.1
Strain : Chloroflexus sp. Y-400-fl
Genome accession: NC_012032
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1431714 - 1434194 bp
Length : 2481 bp
Strand : +
Note : PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: cau:Caur_1034 ATPase AAA-2 domain protein

DNA sequence :
ATGAGACTGGAGCGATTTACCGAAAAAGCGCAAAATGCCTTCCATATTGCGCAAGAGATTATGCAGGAGCATCAACATTC
ACAGCTCGATGTTGAGCATCTCTTTCTGGCGATGCTCCGGCAGCGTGATGGTCTGGCAGCTCGTGCGTTGGCGCGGTTGA
ACGTAGACCCCCACGAGGTGGAACGACGTGTCGAACGCGAGCTGGAAAAGCTCCCTAAGATTCTCAGCCCATACGGTATG
GGCAGTCAGGTCTATATTACGCCACGCACGCAGCGATTAGTCAAGCGGGCAGAGGAAGAGGCTAACCGCCTGGGAGACCA
GTATGTTGGCCTTGATCATCTGCTGATCGGACTGGCCAATGAGCGTGATGGCCCATCGGCGCGGATTTTGCAGAGTTATC
AGATTGATCAGGAGCGGATTTATCAGGTGTTGATGGAGATTCGTGGTAGCCAACGCAGCGATGACCCGTCGGCTGAGAGC
CGCTACGAGATTTTGAGCAAGTATAGCGTCGATTTAACCGAGCTGGCCCGTGAAGATAAGCTCGATCCGGTGATTGGCCG
TGAAGCCGAAATTACGCGGGTCATTCGCATCTTGTCGCGACGGACAAAGAATAATCCGGTGCTGGTCGGCGAAACCGGCG
TCGGCAAGACGGCGATTGTCGAGGGATTGGCCCAGCGTATTGCGCGGGGTGATGTACCACCGACCTTACGTGATCGGAAG
CTGCTGGCGCTCGATCTGGCCGGGATGGTTGCCGGTTCTAAGTTCCGTGGTGAGTTTGAAGAGCGCCTCAAAGCGGTCAT
GGACGAGGTGCGCAATGCGAAGGGGCGGATTATTCTCTTTATCGACGAATTGCATACGGTCGTCGGTGCCGGTGCTGCAA
CCGGTAGCATCGACGCCTCGAATATGCTGAAACCGGCCCTCTCGCGTGGTGAGATTCAGGTGATCGGCGCAACCACCATC
GATGAGTACCGCAAGCATGTCGAGAAAGATGCTGCCCTTGAACGGCGCTTCTCACCGGTTTTCGTCGAAGAACCTGACCC
GGAGACGACGGTCGAGATGCTGCGCGGCCTGCGCAAGCGCTACGAGGAGCATCATCAGCTTACTATCAGCGATGAAGCTC
TACGGGCAGCCGTTCAGCTTTCGAGCCGGTATATTAATGATCGCTTCCTGCCTGACAAGGCGATAGATTTGATCGACGAA
GCCAGTGCCAAGTTGCGCATCGATATCTTCTCGATGCCGCCTGAATTGAAGGCTAAAGAGGAAGAATTGACGCGACTTCA
GGCCGAAGAGGAAGAGGCCGGTGCCCGACGTGATTACGAGCGGGCTGCCCTGCTCCGCTCCCGCTACCTTGCCCTCCAGG
CCCAGTTTGAAGCCGAGCGCAATGAGTGGCTGGCACGCAACAACCTCGATGAAGTTGTCGATGATGAAGATGTGGCCCAG
ATCGTCTCAAGCTGGACGGGTGTGCCGGTCAGTCGTATGCTCGAAACCGAACGCGAGAAGCTCATCCATATGGAAGAGCG
ATTGCACGAGCGCGTGATCGGTCAGCACGAGGCGATTGTCGCCCTGAGCGATGCAATTCGCCGTGCCCGTTCTGGTCTGC
GCGATCCACGGCGCCCGATTGGTTCGTTCCTCTTTGTTGGCCCAACCGGTGTTGGCAAAACTGAGCTGGCGCGTGCCCTC
GCCGAGTTTATGTTTGACAGCGAAGAGGCGATGACCCGCGTCGATATGAGTGAGTATCAGGAACGCCACACCGTCAGTCG
CCTGATCGGTGCGCCACCCGGTTACGTTGGCTATGATGAAGGTGGTCAGTTGACCGAGAGCATTCGCCGCCGACCGTACC
AGGTCGTGCTCTTCGATGAGATCGAAAAGGCGCATCGCGATGTGTTCAATGCCCTCTTGCAGGTGCTTGACGATGGACGC
TTGACCGACGGTCAAGGACGCACGGTCGATTTTCGCAATACCATCATCATCATGACCAGCAATGCCGGCACCGAACATCT
GCAAGGCGGCGGGATTGGTTTCAATGTCGGGGGCAAAAACGCCAAAACGATTGATATGCGTGAGGCGCGAAAGAAGGTCG
ATGAAGCGCTGCGGCAGACCTTCCGGCCCGAATTTTTGAACCGGATCGATGAGATCATTCTCTTCCATCCGCTTTCGATG
GACGATCTGACCAGGATCGTCGAACTCCAGATCGCCGATCTGGTGGAACGGCTGCGCGAACAGCAAATTGGTCTCAGCTT
GACCCAGGCTGCCAAGGAATACCTGGTGCAAGAGGGGTACAATCCGGTCTTTGGTGCACGACCGTTGCGCCGCACCATCC
AGCGCCTCCTCGAAACCCCGATCTCGCGGGAGCTGCTGCGCGGTATGTTCCGGGCCGGTGATCAGATAGAAGTAGATGTC
GAGAATGGTCAACTGGTCTTCCATCGCGGTGGCATCTTGACAATGGAAGAACATCGCCCGGCTGAACCTCTTGATGCCTG
A

Protein sequence :
MRLERFTEKAQNAFHIAQEIMQEHQHSQLDVEHLFLAMLRQRDGLAARALARLNVDPHEVERRVERELEKLPKILSPYGM
GSQVYITPRTQRLVKRAEEEANRLGDQYVGLDHLLIGLANERDGPSARILQSYQIDQERIYQVLMEIRGSQRSDDPSAES
RYEILSKYSVDLTELAREDKLDPVIGREAEITRVIRILSRRTKNNPVLVGETGVGKTAIVEGLAQRIARGDVPPTLRDRK
LLALDLAGMVAGSKFRGEFEERLKAVMDEVRNAKGRIILFIDELHTVVGAGAATGSIDASNMLKPALSRGEIQVIGATTI
DEYRKHVEKDAALERRFSPVFVEEPDPETTVEMLRGLRKRYEEHHQLTISDEALRAAVQLSSRYINDRFLPDKAIDLIDE
ASAKLRIDIFSMPPELKAKEEELTRLQAEEEEAGARRDYERAALLRSRYLALQAQFEAERNEWLARNNLDEVVDDEDVAQ
IVSSWTGVPVSRMLETEREKLIHMEERLHERVIGQHEAIVALSDAIRRARSGLRDPRRPIGSFLFVGPTGVGKTELARAL
AEFMFDSEEAMTRVDMSEYQERHTVSRLIGAPPGYVGYDEGGQLTESIRRRPYQVVLFDEIEKAHRDVFNALLQVLDDGR
LTDGQGRTVDFRNTIIIMTSNAGTEHLQGGGIGFNVGGKNAKTIDMREARKKVDEALRQTFRPEFLNRIDEIILFHPLSM
DDLTRIVELQIADLVERLREQQIGLSLTQAAKEYLVQEGYNPVFGARPLRRTIQRLLETPISRELLRGMFRAGDQIEVDV
ENGQLVFHRGGILTMEEHRPAEPLDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 3e-167 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chy400_1132 YP_002568879.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 0.0 52