Gene Information

Name : Chy400_1088 (Chy400_1088)
Accession : YP_002568836.1
Strain : Chloroflexus sp. Y-400-fl
Genome accession: NC_012032
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1382088 - 1382891 bp
Length : 804 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_0997 ABC transporter related

DNA sequence :
GTGACGACTGAATATCGAGGCCGGCCAATTGTTGAGTTGCGCAATATTCGCAAGACGTTCCCAACCGGCGATGGCGAATT
TGTTGCGCTGGACGATATTAGCCTGACAATTGAAGAGGGCGAGATGGTCGCCATTATGGGGCCATCGGGGAGTGGTAAGA
GTACGCTGATGACGCTGATCGGGTTGCTCGACAGCCCGACAAGTGGCGAGTATATCCTCGATGGCGTTGATGTCTCGCGC
CTGAACCGCCAGGAACAGGCCCGGATTCGCAATCGGAAACTGGGCTTCGTCTTCCAGAACTTTAATCTGTTGCCCCGTCT
GACGGCGCAGAAAAATGTTGAGTTGCCACTGGTGTATGGTCGGGTCGGCGCGCGCGAACGGGCCGAACGGGCGCGCGCAG
CTCTGGAAGCGGTCGGTCTGGGCCACAAGCTCAATAACCTGCCCAACACCCTGTCGGGCGGGCAGAAGCAGCGGGTGGCG
ATTGCGCGGGCACTGGTGCATGATCCGGCGATTATTCTGGCCGACGAGCCAACCGGTGCCCTCGATACACGCACCGGGGC
CGAGATTATGGCGCTCTTTCGCCAGCTCAATCGCGAACAGGGGCGAACTATCGTGATTGTTACCCACGATCCGGAGATTG
GCCGGCACATGGATCGGGTGATCGGTCTGCGTGACGGACGCCTGGTTGACAATATCTTGAGCGAATACTACGGGGTTGAG
GTGCTGGAGGAGGTTGAGCGGAGTCGTGATCTGGAGCCGGTACCGGTTCCGGTGCGGCGTCAGCCAACCGACGAGGCCGC
CTGA

Protein sequence :
MTTEYRGRPIVELRNIRKTFPTGDGEFVALDDISLTIEEGEMVAIMGPSGSGKSTLMTLIGLLDSPTSGEYILDGVDVSR
LNRQEQARIRNRKLGFVFQNFNLLPRLTAQKNVELPLVYGRVGARERAERARAALEAVGLGHKLNNLPNTLSGGQKQRVA
IARALVHDPAIILADEPTGALDTRTGAEIMALFRQLNREQGRTIVIVTHDPEIGRHMDRVIGLRDGRLVDNILSEYYGVE
VLEEVERSRDLEPVPVPVRRQPTDEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-25 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 9e-31 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-26 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-26 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-26 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-24 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Chy400_1088 YP_002568836.1 ABC transporter NC_012469.1.7686878. Protein 5e-52 56
Chy400_1088 YP_002568836.1 ABC transporter NC_008702.1.4606598. Protein 7e-38 50
Chy400_1088 YP_002568836.1 ABC transporter CP001581.1.gene598.p Protein 4e-36 44
Chy400_1088 YP_002568836.1 ABC transporter CP001581.1.gene798.p Protein 6e-36 44
Chy400_1088 YP_002568836.1 ABC transporter NC_012469.1.7685735. Protein 2e-37 41