Gene Information

Name : Hlac_0540 (Hlac_0540)
Accession : YP_002565212.1
Strain :
Genome accession: NC_012029
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 561082 - 561972 bp
Length : 891 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: hma:pNG7276 ferrichrome ABC transporter ATP-binding protein

DNA sequence : 
ATGTCTACCGAACACGCGAACGCGACGGATTCGGAGGTACCGAGCGGAACGACCGACGCGAGCGAGACGGTCGATTCGGT
CGGCGCGGGAGACGCGAGCGCTCTCGACGCCGAGAGCCTCGTGTTGGGGTATCCGAACGCACCGGCTCCCGTCATCGACG
GCGAGTCGATCGCGGCCGAGCCCGGCGCGGTCACGGCCCTCGTCGGCCCGAACGGCTCGGGGAAGAGCACCCTGTTGAAG
GGGTTGGCGACGCAGCTCGCGCCGGACGACGGCTCCGTGATGGTCGACGGCCGCGACGTGCATGCGATGGACACGAAGGC
GCTCGCCCGGAAGCTCGGGCTGCTCTCGCAGGAGAGCACCTCGCCGAACAGCATCACGGTCGATGACTTGGTGTACCACG
GTCGGTACCCGCACCGCGGGTTCTTCGAGCGGACGACCGACGAGGACGCGCGCGCCGTCGAGCAAGCGATCGAACTGGCC
GGCTGCGGCCACCTGCGCGAGCGCGAGGTCGGGAGCCTCAGCGGCGGGCAGAAACAGTTGGCGTGGATCGCGATGGTCCT
CGCACAGGAAACCGACGTACTCCTCTTAGACGAGCCGACGACGTTCCTCGATTTACACCACCAGATGGAGGTGATGGAGA
TCATCGAAACCCTGCGCGACGAGAGCGACGTGACCGTCGTCGTCGTGCTCCACGACATCGAGCAGGCCGCCCGGCTCGCG
GATCGGATGGTCGCGCTCAAGGACGGCGAGATCCGTGCCCGCGGCGCCCCCGAGGAGATCGTCACCGAGGACCTGCTCGC
GGACGTGTTCCGCGTCGACGCCGACGTGGTACAGACCGAGAACGGCCCGCGCGTCACCCCGCTTCGGGCGCGACACGAAG
ACACAGAGTAG

Protein sequence : 
MSTEHANATDSEVPSGTTDASETVDSVGAGDASALDAESLVLGYPNAPAPVIDGESIAAEPGAVTALVGPNGSGKSTLLK
GLATQLAPDDGSVMVDGRDVHAMDTKALARKLGLLSQESTSPNSITVDDLVYHGRYPHRGFFERTTDEDARAVEQAIELA
GCGHLREREVGSLSGGQKQLAWIAMVLAQETDVLLLDEPTTFLDLHHQMEVMEIIETLRDESDVTVVVVLHDIEQAARLA
DRMVALKDGEIRARGAPEEIVTEDLLADVFRVDADVVQTENGPRVTPLRARHEDTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-47 42
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-45 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hlac_0540 YP_002565212.1 ABC transporter BAC0164 Protein 1e-45 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hlac_0540 YP_002565212.1 ABC transporter VFG0925 Protein 2e-52 44
Hlac_0540 YP_002565212.1 ABC transporter VFG1042 Protein 9e-46 42