Gene Information

Name : Hlac_2170 (Hlac_2170)
Accession : YP_002566817.1
Strain :
Genome accession: NC_012029
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2158438 - 2159181 bp
Length : 744 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: hwa:HQ2018A peptide ABC transporter ATP-binding protein

DNA sequence :
ATGTATAGCGTCGAGCTCCGCGGCGTGACCAAGCGGTACCCGGGCGGAGGCGGCGAGCCGGTGGTGGCGCTCGACACTGT
TGACTTCGCGGTCGAGCCGGGAGAGTTCGTCGCGGTCGTCGGCCCCAGCGGCTCCGGGAAGTCGACGCTCCTCAACGTGC
TCGGGCTCCTCGATGACCCCACCGAGGGGCAGCGCCTGCTGGACGGTACCGACGTGACCGAGCTCACGGTCGCCGAGCGC
ACCGCGGCTCGAAAGGAATCGATCGGGTTCGTCTTCCAGGACTTCCACCTGTTGCCGACGCTGACCGCGGTCGAGAACGT
CGCGCTCCCGACCGCGTTCGATCCGGGCGACGAGAGCGACCGCGCCGCCGACCTGCTCAAGCGGTTCGGGCTCGGCGACC
GGCTCGATCACAAACCCGCGGAGCTGTCCGGCGGGCAGAAACAACGGGTCGCCATCGCCAGAGCGCTCATCAACGAGCCG
GCGGTGCTGCTCGCCGACGAGCCGACGGGGAACCTCGACACGGAGACCGGCAAGTCGATCCTCGCCGAGTTCGAACGCGT
GAAGGAGGAAGGGGTCGCCGTCATCGCCGTCACACACGATCCGCTGGTCGAGGAGTATGCGGACCGCGTCGTCGAACTCA
CGGACGGGGTACTGGTCGGCGGAATCCCGGACGGGGCGTCCTCGGCGGACGGCTTCTCGTCGGCCCGTGACGCCGACTCG
GCACCCGCACCGGAGGAACGATGA

Protein sequence :
MYSVELRGVTKRYPGGGGEPVVALDTVDFAVEPGEFVAVVGPSGSGKSTLLNVLGLLDDPTEGQRLLDGTDVTELTVAER
TAARKESIGFVFQDFHLLPTLTAVENVALPTAFDPGDESDRAADLLKRFGLGDRLDHKPAELSGGQKQRVAIARALINEP
AVLLADEPTGNLDTETGKSILAEFERVKEEGVAVIAVTHDPLVEEYADRVVELTDGVLVGGIPDGASSADGFSSARDADS
APAPEER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hlac_2170 YP_002566817.1 ABC transporter NC_008702.1.4606598. Protein 5e-43 52
Hlac_2170 YP_002566817.1 ABC transporter NC_012469.1.7686878. Protein 6e-45 46
Hlac_2170 YP_002566817.1 ABC transporter CP001581.1.gene798.p Protein 2e-38 42
Hlac_2170 YP_002566817.1 ABC transporter CP001581.1.gene598.p Protein 1e-36 42
Hlac_2170 YP_002566817.1 ABC transporter NC_012469.1.7685735. Protein 2e-38 42